RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 RNF168Q8IYW5 571 aaPredicted RBP4.04□□□□□ -1.76
SUB1-202ENST00000502453 ANKLE1Q8NAG6 615 aa4.04□□□□□ -1.76
SUB1-202ENST00000502453 USP38Q8NB14 1042 aa4.04□□□□□ -1.76
SUB1-202ENST00000502453 AUTS2Q8WXX7 1259 aa4.04□□□□□ -1.76
SUB1-202ENST00000502453 NAF1Q96HR8 494 aaKnown RBP4.04□□□□□ -1.76
SUB1-202ENST00000502453 JAM3Q9BX67 310 aa4.04□□□□□ -1.76
SUB1-202ENST00000502453 ETAA1Q9NY74 926 aa4.04□□□□□ -1.76
SUB1-202ENST00000502453 CTAGE9A4FU28 777 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 J3QL48 77 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 K7EPI3 171 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 TBC1D4O60343 1298 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 TBX10O75333 385 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SRGAP2BP0DMP2 458 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 ITIH2P19823 946 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 MAOBP27338 520 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PGM1P36871 562 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PPARGP37231 505 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 RGS2P41220 211 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 BUD31P41223 144 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 SLC12A3P55017 1021 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SLC26A5P58743 744 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 TRIM28Q13263 835 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 TBCCQ15814 346 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 IMMTQ16891 758 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 KIZQ2M2Z5 673 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 HSP90AA5PQ58FG0 334 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 RBM20Q5T481 1227 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 MEX3CQ5U5Q3 659 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 TAF2Q6P1X5 1199 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 USP49Q70CQ1 688 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 CCDC186Q7Z3E2 898 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 KCNK18Q7Z418 384 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PRPF39Q86UA1 669 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 TUSC5Q8IXB3 177 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 RHOT1Q8IXI2 618 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 LRRC43Q8N309 656 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.03□□□□□ -1.76
SUB1-202ENST00000502453 ETNPPLQ8TBG4 499 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 DEPDC1BQ8WUY9 529 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 NCSTNQ92542 709 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 ANKS1AQ92625 1134 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 VRK1Q99986 396 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 UTP14AQ9BVJ6 771 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 SEMA6BQ9H3T3 888 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 BRF2Q9HAW0 419 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 GPR27Q9NS67 375 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 MYO1AQ9UBC5 1043 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 FETUBQ9UGM5 382 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 ADAM30Q9UKF2 790 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 TBX20Q9UMR3 447 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 AP4E1Q9UPM8 1137 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 KLHL20Q9Y2M5 609 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PCDHA1Q9Y5I3 950 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 MYPNQ86TC9 1320 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 KIF21AQ7Z4S6 1674 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 hCG_1809904A0A1W2PP81 198 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 A0A1W2PPE2 198 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 A0A1W2PR64 198 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 LRRC72A6NJI9 287 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 A8MVJ9 347 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 FAM47E-STBD1D6RA91 191 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 ZNF254O75437 659 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PIAS2O75928 621 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 CSPG5O95196 566 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 MTHFD2P13995 350 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 CD40P25942 277 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 CIITAP33076 1130 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 ARFIP1P53367 373 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 C21orf58P58505 322 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 RPS3AP61247 264 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 GBE1Q04446 702 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 RCN2Q14257 317 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SUZ12Q15022 739 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 CCDC122Q5T0U0 273 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 MCTP2Q6DN12 878 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 GDF6Q6KF10 455 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 RALYLQ86SE5 291 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 CXorf67Q86X51 503 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 GATAD2AQ86YP4 633 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 LINS1Q8NG48 757 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SCAMP5Q8TAC9 235 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SSH1Q8WYL5 1049 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PLVAPQ9BX97 442 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 FAM129AQ9BZQ8 928 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 WNT10AQ9GZT5 417 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 BRD8Q9H0E9 1235 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PRDM12Q9H4Q4 367 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PCDHB16Q9NRJ7 776 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 CNNM1Q9NRU3 951 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 DECR2Q9NUI1 292 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 DDX18Q9NVP1 670 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 SPATA7Q9P0W8 599 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 IQSEC2Q5JU85 1478 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 H0Y8X5 98 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 ZBTB14O43829 449 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PRPSAP2O60256 369 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SLC22A3O75751 556 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 COL6A2P12110 1019 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 NFKBIAP25963 317 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 RFC1P35251 1148 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms