RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 CARNS1A5YM72 827 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 SYN3O14994 580 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 MFAP3LO75121 409 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 LMO2P25791 158 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 TKTP29401 623 aaKnown RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 CLCN1P35523 988 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 ALDH7A1P49419 539 aaKnown RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 RAD23BP54727 409 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 MFAP3P55082 362 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 SMAD3P84022 425 aaKnown RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 ZBED6P86452 979 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 GOLGA8FQ08AF8 430 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 GOLGA8DPQ0D2H9 430 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 TRIM14Q14142 442 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 LRIT3Q3SXY7 679 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 RTP2Q5QGT7 225 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 RSPO2Q6UXX9 243 aaPredicted RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 SCARA5Q6ZMJ2 495 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 GPR65Q8IYL9 337 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 CRYBG2Q8N1P7 616 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 KLHL23Q8NBE8 558 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 SLC4A11Q8NBS3 891 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 SYN2Q92777 582 aaPredicted RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 FAM81BQ96LP2 452 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 HERC2P3Q9BVR0 1158 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 PLVAPQ9BX97 442 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 IMPG2Q9BZV3 1241 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 NLRC4Q9NPP4 1024 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 IMPACTQ9P2X3 320 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 BARX2Q9UMQ3 279 aaPredicted RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 STXBP5LQ9Y2K9 1186 aa11.69□□□□□ -0.54
CCDC142-209ENST00000497232 TIMM13Q9Y5L4 95 aaPredicted RBP11.69□□□□□ -0.54
CCDC142-209ENST00000497232 CDH23Q9H251 3354 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 SF3B1O75533 1304 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC142-209ENST00000497232 EPOPA6NHQ4 379 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 LRRC53A6NM62 1247 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 TADA2AO75478 443 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 FGF18O76093 207 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 SOD2P04179 222 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 TRIM21P19474 475 aaKnown RBP11.68□□□□□ -0.54
CCDC142-209ENST00000497232 SOX5P35711 763 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 PPM1AP35813 382 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 PRKCIP41743 596 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 TNNC1P63316 161 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 DSG1Q02413 1049 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 MEA1Q16626 185 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
CCDC142-209ENST00000497232 UNC93AQ86WB7 457 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 TMEM139Q8IV31 216 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 ADGRF2Q8IZF7 708 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 TMEM86AQ8N2M4 240 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 APPL2Q8NEU8 664 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 OR10T2Q8NGX3 314 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 LNX1Q8TBB1 728 aaPredicted RBP11.68□□□□□ -0.54
CCDC142-209ENST00000497232 SPPL3Q8TCT6 385 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 PIK3R5Q8WYR1 880 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 B3GALT6Q96L58 329 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 ACP6Q9NPH0 428 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
CCDC142-209ENST00000497232 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
CCDC142-209ENST00000497232 FSCN2O14926 492 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 HUS1O60921 280 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 VNN2O95498 520 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 CALCAP01258 141 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 RB1P06400 928 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 ODC1P11926 461 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 P4HA1P13674 534 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 DNAJB2P25686 324 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 KRT9P35527 623 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 NDST1P52848 882 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 ADKP55263 362 aaKnown RBP11.67□□□□□ -0.54
CCDC142-209ENST00000497232 ELAVL2Q12926 359 aaKnown RBP11.67□□□□□ -0.54
CCDC142-209ENST00000497232 RAB30Q15771 203 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 ARHGAP44Q17R89 818 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 CCDC142Q17RM4 750 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
CCDC142-209ENST00000497232 FAM171A1Q5VUB5 890 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 FAM171BQ6P995 826 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 DSTYKQ6XUX3 929 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 LRRTM3Q86VH5 581 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 CCDC150Q8NCX0 1101 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 TFAP2BQ92481 460 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 TGS1Q96RS0 853 aaKnown RBP11.67□□□□□ -0.54
CCDC142-209ENST00000497232 TMEM209Q96SK2 561 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 MMS19Q96T76 1030 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 LPIN3Q9BQK8 851 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 ZBP1Q9H171 429 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 DPEP3Q9H4B8 488 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 CRTAC1Q9NQ79 661 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 NOCTQ9UK39 431 aaKnown RBP11.67□□□□□ -0.54
CCDC142-209ENST00000497232 NENFQ9UMX5 172 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 RWDD3Q9Y3V2 267 aa11.67□□□□□ -0.54
CCDC142-209ENST00000497232 PCDHB12Q9Y5F1 795 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms