RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 FAM90A1Q86YD7 464 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 SH2D3CQ8N5H7 860 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TNPO1Q92973 898 aaKnown RBP5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 GPR35Q9HC97 309 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RLIMQ9NVW2 624 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ETAA1Q9NY74 926 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ARPP21Q9UBL0 812 aaPredicted RBP5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ABCF2Q9UG63 623 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ENTPD2Q9Y5L3 495 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 SPATA31A3Q5VYP0 1347 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TRIAP1O43715 76 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PROP1O75360 226 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 KIF20AO95235 890 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ARIH2O95376 493 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 POU2F2P09086 479 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 FTH1P19P0C7X4 201 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 LMO1P25800 156 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NDUFV1P49821 464 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 FXR1P51114 621 aaKnown RBP eCLIP5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 HK3P52790 923 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ITIH3Q06033 890 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 KIF22Q14807 665 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 THEMIS2Q5TEJ8 643 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RGMAQ96B86 450 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TIMP4Q99727 224 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 AMBRA1Q9C0C7 1298 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 KLC4Q9NSK0 619 aa5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 LUC7L2Q9Y383 392 aaKnown RBP5.68□□□□□ -1.5
RAB3GAP1-206ENST00000497080 WDR27A2RRH5 827 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 LINC00473A8K010 186 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RBMXL2O75526 392 aaKnown RBP5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 IL33O95760 270 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 CHEK2O96017 543 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 FTLP02792 175 aaPredicted RBP5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RHOP08100 348 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RARBP10826 455 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 CHRM3P20309 590 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 MAP2K6P52564 334 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 CATIPQ7Z7H3 387 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 USP37Q86T82 979 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 CPA6Q8N4T0 437 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PSD4Q8NDX1 1056 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ZCRB1Q8TBF4 217 aaKnown RBP5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 HAPLN3Q96S86 360 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 CNPPD1Q9BV87 410 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 MRPL46Q9H2W6 279 aaKnown RBP5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 FRMD4BQ9Y2L6 1034 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PCDHA1Q9Y5I3 950 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ADGRA2Q96PE1 1338 aa5.67□□□□□ -1.5
RAB3GAP1-206ENST00000497080 SLC16A6O15403 523 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 DTNBO60941 627 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 GPD1P21695 349 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 KRTAP1-1Q07627 177 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PPP1R3BQ86XI6 285 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 HSPBAP1Q96EW2 488 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 WDCPQ9H6R7 721 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 LMBRD1Q9NUN5 540 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RAD54BQ9Y620 910 aa5.66□□□□□ -1.5
RAB3GAP1-206ENST00000497080 AHSGP02765 367 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NR2F6P10588 404 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TYRP14679 529 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 WT1P19544 449 aaPredicted RBP5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TOB1P50616 345 aaPredicted RBP5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PTPROQ16827 1216 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PGS1Q32NB8 556 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RBM20Q5T481 1227 aaKnown RBP5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ZNF788Q6ZQV5 615 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ZBTB46Q86UZ6 589 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 RASAL3Q86YV0 1011 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 OSBPL9Q96SU4 736 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ACTRT3Q9BYD9 372 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 GTPBP4Q9BZE4 634 aaKnown RBP5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TINAGL1Q9GZM7 467 aaPredicted RBP5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 SIK2Q9H0K1 926 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PNPOQ9NVS9 261 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 DKK3Q9UBP4 350 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 FEZ2Q9UHY8 353 aaPredicted RBP5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ZDHHC8Q9ULC8 765 aa5.65□□□□□ -1.5
RAB3GAP1-206ENST00000497080 KAT6AQ92794 2004 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 H3BUI4 141 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 GNAI2P04899 355 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ITGALP20701 1170 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ITPKBP27987 946 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PROK1P58294 105 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 EXOSC10Q01780 885 aaKnown RBP5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 TCF15Q12870 199 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 BOP1Q14137 746 aaKnown RBP5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CCDC157Q569K6 752 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 TMEM240Q5SV17 173 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 AMIGO2Q86SJ2 522 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 RFKQ969G6 155 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SARAFQ96BY9 339 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CHMP4CQ96CF2 233 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ADAM21Q9UKJ8 722 aa5.64□□□□□ -1.51
RAB3GAP1-206ENST00000497080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 M0QYG6 137 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SOAT2O75908 522 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms