RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ST3GAL2Q16842 350 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 MUM1Q2TAK8 710 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 TMEM31Q5JXX7 168 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 DGKKQ5KSL6 1271 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 TTLL5Q6EMB2 1281 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 PTF1AQ7RTS3 328 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 NKAIN3Q8N8D7 197 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 RPGRQ92834 1020 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 SECISBP2LQ93073 1101 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 FERMT2Q96AC1 680 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 ZBTB10Q96DT7 871 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 KIAA1683Q9H0B3 1180 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 TMEM168Q9H0V1 697 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 XYLT2Q9H1B5 865 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 PRKRIP1Q9H875 184 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 SH3GLB2Q9NR46 395 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 POLR3BQ9NW08 1133 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 CWC25Q9NXE8 425 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 AFG3L2Q9Y4W6 797 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 PCDHB6Q9Y5E3 794 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 CDY2AQ9Y6F7 541 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 DUSP10Q9Y6W6 482 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 CRB1P82279 1406 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 MYO5CQ9NQX4 1742 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 ADGRB3O60242 1522 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 ITIH6Q6UXX5 1313 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 A0A087WV62 115 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 A0A1W2PR48 441 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 MED19A0JLT2 244 aaPredicted RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 MROH6A6NGR9 719 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 RRN3P2A6NIE6 340 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 NCK2O43639 380 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 TMCC2O75069 709 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 POU2F2P09086 479 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 ZSCAN22P10073 491 aaPredicted RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 AGXTP21549 392 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 RAD52P43351 418 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 GPR15P49685 360 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 LGALS4P56470 323 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 BTKQ06187 659 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 PRKG2Q13237 762 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 IFIT5Q13325 482 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 NFYCQ13952 458 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 PCOLCEQ15113 449 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 TAF11Q15544 211 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 CLUL1Q15846 466 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 UGT8Q16880 541 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 PDZD4Q76G19 769 aaPredicted RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 OTOP2Q7RTS6 562 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 GALNT5Q7Z7M9 940 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 CLEC14AQ86T13 490 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 SIAH1Q8IUQ4 282 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 GRAMD1CQ8IYS0 662 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 KIAA0319LQ8IZA0 1049 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 CDYL2Q8N8U2 506 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 RSAD2Q8WXG1 361 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 RSPH1Q8WYR4 309 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 DYDC2Q96IM9 177 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 LCORQ96JN0 433 aaPredicted RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 GUCD1Q96NT3 240 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 NOL10Q9BSC4 688 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 QRSL1Q9H0R6 528 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 TMEM60Q9H2L4 133 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 YTHDC2Q9H6S0 1430 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 ADGRL3Q9HAR2 1447 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 ARFGAP3Q9NP61 516 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 DMRT3Q9NQL9 472 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 VPS45Q9NRW7 570 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 TBC1D22BQ9NU19 505 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 ABT1Q9ULW3 272 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 EDARQ9UNE0 448 aa4.25□□□□□ -1.73
EXOSC3-208ENST00000496910 PTPRZ1P23471 2315 aaPredicted RBP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 PEAK1Q9H792 1746 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 SAMD9Q5K651 1589 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 SPATA31E1Q6ZUB1 1445 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 C2orf78A6NCI8 922 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 FAM227AF5H4B4 570 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 AREL1O15033 823 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 BAIAP3O94812 1187 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 HMGCRP04035 888 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 HNRNPLP14866 589 aaKnown RBP eCLIP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 C5AR1P21730 350 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 TNFSF4P23510 183 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 PEX2P28328 305 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 SMARCA1P28370 1054 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 PPARAQ07869 468 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 DUSP8Q13202 625 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 USP10Q14694 798 aaKnown RBP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 CCDC38Q502W7 563 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 CCDC92Q53HC0 331 aaPredicted RBP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 CCDC178Q5BJE1 867 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 TOR2AQ5JU69 321 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 NT5DC1Q5TFE4 455 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 AGBL4Q5VU57 503 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 FAAH2Q6GMR7 532 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 SWSAP1Q6NVH7 229 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 COL23A1Q86Y22 540 aaPredicted RBP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 KRT78Q8N1N4 520 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms