RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PHF20Q9BVI0 1012 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 PACSIN1Q9BY11 444 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 KIAA1210Q9ULL0 1709 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 IQANK1A0A1B0GTG1 560 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 FAM170AA1A519 330 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 GOLGA8JA6NMD2 632 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 GOLGA8MH3BSY2 632 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 K7EPI3 171 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 ZNF862O60290 1169 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 LPXNO60711 386 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 INHBAP08476 426 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 KCNA6P17658 529 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 PHKA2P46019 1235 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 ACTR3P61158 418 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 PRAMEP78395 509 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 SLC39A6Q13433 755 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 SMU1Q2TAY7 513 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 MYLK3Q32MK0 819 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 SCARA3Q6AZY7 606 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 C4orf22Q6V702 233 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 TPTE2Q6XPS3 522 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 VPS37AQ8NEZ2 397 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 OR7G1Q8NGA0 311 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 GIPC2Q8TF65 315 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 FAM172AQ8WUF8 416 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 NRG4Q8WWG1 115 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 C18orf8Q96DM3 657 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 C9orf72Q96LT7 481 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 TRPV6Q9H1D0 765 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 AS3MTQ9HBK9 375 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 SEC31BQ9NQW1 1179 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 TAS2R1Q9NYW7 299 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 MTMR7Q9Y216 660 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 EVPLLA8MZ36 301 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 FAM25AB3EWG3 89 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 FAM25CB3EWG5 89 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 FAM25GB3EWG6 89 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 H3BSA7 217 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 KMOO15229 486 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 TFPTP0C1Z6 253 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 GPC3P51654 580 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 PTK2Q05397 1052 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 FSCBQ5H9T9 825 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 CCDC81Q6ZN84 652 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 CYP4V2Q6ZWL3 525 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 TCAIMQ8N3R3 496 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 MINDY2Q8NBR6 621 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 NEDD1Q8NHV4 660 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 HELQQ8TDG4 1101 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 ZC3H15Q8WU90 426 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 RPGRQ92834 1020 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 OSBP2Q969R2 916 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 PPP1R10Q96QC0 940 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 FOXP3Q9BZS1 431 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 ZNF287Q9HBT7 754 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 WHRNQ9P202 907 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 IGSF9Q9P2J2 1179 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 PSMC3IPQ9P2W1 217 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 INPP5FQ9Y2H2 1132 aa8.57□□□□□ -1.04
CRNKL1-205ENST00000496549 GAS7O60861 476 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 CYP1A1P04798 512 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 GNA11P29992 359 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 NPEPPSP55786 919 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 CTDSPL2Q05D32 466 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 TRAF2Q12933 501 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 ARHGAP44Q17R89 818 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 RAPH1Q70E73 1250 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 CMTM5Q96DZ9 223 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 AK8Q96MA6 479 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 TTYH3Q9C0H2 523 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 SNX25Q9H3E2 840 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 ALG13Q9NP73 1137 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 NEU2Q9Y3R4 380 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 STRCQ7RTU9 1775 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 hCG_1642624A0A1W2PR95 340 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 CAPN8A6NHC0 703 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 WNT7AO00755 349 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 PRDM1O75626 825 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 GABBR2O75899 941 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 CHRNB1P11230 501 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 NCF2P19878 526 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 GNG2P59768 71 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 DLG1Q12959 904 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 NONOQ15233 471 aaKnown RBP eCLIP8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 SLC10A5Q5PT55 438 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 PERM1Q5SV97 790 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 TEDDM1Q5T9Z0 273 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 TRIM59Q8IWR1 403 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 MED30Q96HR3 178 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 HGH1Q9BTY7 390 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 CCSER2Q9H7U1 834 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 ARMCX1Q9P291 453 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 SALL4Q9UJQ4 1053 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 TMEM59LQ9UK28 342 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 PALLDQ8WX93 1383 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 PSMD11O00231 422 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 LAD1O00515 517 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 VWA5AO00534 786 aa8.56□□□□□ -1.04
CRNKL1-205ENST00000496549 ITM2AO43736 263 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms