RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 TRIM14Q14142 442 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 USP41Q3LFD5 358 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 METTL23Q86XA0 190 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 CEP57Q86XR8 500 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 TTC39CQ8N584 583 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 SPATA18Q8TC71 538 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 SHC3Q92529 594 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 TTPALQ9BTX7 342 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 C11orf84Q9BUA3 381 aaPredicted RBP20.82■□□□□ 0.92
ATG3-208ENST00000495756 CHST7Q9NS84 486 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 GABRDO14764 452 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 JAM2P57087 298 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 YWHAHQ04917 246 aaPredicted RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 TBX2Q13207 712 aaPredicted RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 DRAP1Q14919 205 aaPredicted RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 RTP2Q5QGT7 225 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 OVOS1Q6IE37 1185 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 PPFIBP1Q86W92 1011 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 OSTM1Q86WC4 334 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 DRC7Q8IY82 874 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 CPLX3Q8WVH0 158 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 BAP1Q92560 729 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 HERC2P3Q9BVR0 1158 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 GPR88Q9GZN0 384 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 SNX25Q9H3E2 840 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 BARX2Q9UMQ3 279 aaPredicted RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 CAPN11Q9UMQ6 739 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 LZTS1Q9Y250 596 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 PLXNA4Q9HCM2 1894 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 CDH23Q9H251 3354 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 F8VZ95 297 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 RNF225M0QZC1 329 aaPredicted RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 FOXN3O00409 490 aaPredicted RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 CILPO75339 1184 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 OAZ2O95190 189 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 GNL1P36915 607 aaPredicted RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 LHX1P48742 406 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 VARS2Q5ST30 1063 aaKnown RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 VPS52Q8N1B4 723 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 FBXO22Q8NEZ5 403 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 OR6B3Q8NGW1 331 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 ANP32BQ92688 251 aaKnown RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 SPAG5Q96R06 1193 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 CERS4Q9HA82 394 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 ALG13Q9NP73 1137 aaKnown RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 PUF60Q9UHX1 559 aaKnown RBP20.81■□□□□ 0.92
ATG3-208ENST00000495756 CNTN6Q9UQ52 1028 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 STXBP5LQ9Y2K9 1186 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 PCDHB4Q9Y5E5 795 aa20.81■□□□□ 0.92
ATG3-208ENST00000495756 CASP14P31944 242 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 FXR1P51114 621 aaKnown RBP eCLIP20.8■□□□□ 0.92
ATG3-208ENST00000495756 NDST1P52848 882 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 MRPL58Q14197 206 aaKnown RBP20.8■□□□□ 0.92
ATG3-208ENST00000495756 SMYD5Q6GMV2 418 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 KIAA1841Q6NSI8 718 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 TMEM270Q6UE05 265 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 SPPL3Q8TCT6 385 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 RTP3Q9BQQ7 232 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 DDX43Q9NXZ2 648 aaKnown RBP20.8■□□□□ 0.92
ATG3-208ENST00000495756 HMGXB4Q9UGU5 601 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 LUC7L2Q9Y383 392 aaKnown RBP20.8■□□□□ 0.92
ATG3-208ENST00000495756 NME7Q9Y5B8 376 aa20.8■□□□□ 0.92
ATG3-208ENST00000495756 H3BNC9 293 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 TPM1P09493 284 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 PNMA6AP0CW24 399 aaPredicted RBP20.79■□□□□ 0.92
ATG3-208ENST00000495756 KRT5P13647 590 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 LMO2P25791 158 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 GLUD2P49448 558 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 DSG1Q02413 1049 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 UBE3AQ05086 875 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 KIAA0319Q5VV43 1072 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 UNC93AQ86WB7 457 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 FAM71AQ8IYT1 594 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 WHAMMQ8TF30 809 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 ARNTL2Q8WYA1 636 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 RIN2Q8WYP3 895 aaPredicted RBP20.79■□□□□ 0.92
ATG3-208ENST00000495756 MYO6Q9UM54 1294 aa20.79■□□□□ 0.92
ATG3-208ENST00000495756 A8MXQ7 604 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 HCRTO43612 131 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 URODP06132 367 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 USP8P40818 1118 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 ZNF132P52740 706 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 ZBED6P86452 979 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 GPM6BQ13491 265 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 ANKS3Q6ZW76 656 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 THEM5Q8N1Q8 247 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 SPC24Q8NBT2 197 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 ZNF397Q8NF99 534 aaPredicted RBP20.78■□□□□ 0.92
ATG3-208ENST00000495756 LNX1Q8TBB1 728 aaPredicted RBP20.78■□□□□ 0.92
ATG3-208ENST00000495756 POF1BQ8WVV4 589 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 PIK3R5Q8WYR1 880 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 TWNKQ96RR1 684 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 NT5C1AQ9BXI3 368 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 ELOVL4Q9GZR5 314 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 ZBP1Q9H171 429 aa20.78■□□□□ 0.92
ATG3-208ENST00000495756 LRRC53A6NM62 1247 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 H7C4K7 107 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 GRM6O15303 877 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 PDGFRBP09619 1106 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 CTSAP10619 480 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms