RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 ARRDC4Q8NCT1 418 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 TFAP2BQ92481 460 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 C18orf25Q96B23 403 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-245ENST00000494862 TMEM176AQ96HP8 235 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 HES6Q96HZ4 224 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 PSMB7Q99436 277 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 ZSWIM1Q9BR11 485 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 GOLPH3Q9H4A6 298 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 KLK14Q9P0G3 267 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 ADAM22Q9P0K1 906 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 BARX2Q9UMQ3 279 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-245ENST00000494862 PACSIN2Q9UNF0 486 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-245ENST00000494862 NOD1Q9Y239 953 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 ALG6Q9Y672 507 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 PTCH2Q9Y6C5 1203 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 SQORQ9Y6N5 450 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 RALGAPA2Q2PPJ7 1873 aa12.23□□□□□ -0.45
HDLBP-245ENST00000494862 FAM170AA1A519 330 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 PIRO00625 290 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 KCNK3O14649 394 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 SLC34A2O95436 690 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 VDRP11473 427 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 ITGA4P13612 1032 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 CD19P15391 556 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 ZSCAN20P17040 1043 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-245ENST00000494862 CXCR5P32302 372 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 PNPLA4P41247 253 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 PTP4A2Q12974 167 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 DSC3Q14574 896 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 GLRA4Q5JXX5 417 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 MRPL10Q7Z7H8 261 aaKnown RBP12.22□□□□□ -0.45
HDLBP-245ENST00000494862 USP38Q8NB14 1042 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 SLC4A11Q8NBS3 891 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 MSANTD4Q8NCY6 345 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 ZNF560Q96MR9 790 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 SEZ6LQ9BYH1 1024 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 ELOVL4Q9GZR5 314 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 LHX5Q9H2C1 402 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 AGO3Q9H9G7 860 aaKnown RBP12.22□□□□□ -0.45
HDLBP-245ENST00000494862 TRMT13Q9NUP7 481 aaKnown RBP12.22□□□□□ -0.45
HDLBP-245ENST00000494862 FAM105AQ9NUU6 356 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 KIAA1257Q9ULG3 409 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 TRIM17Q9Y577 477 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 CEP83Q9Y592 693 aa12.22□□□□□ -0.45
HDLBP-245ENST00000494862 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-245ENST00000494862 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 A0A1W2PQ45 241 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 A0A1W2PQY0 241 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 MIF4GDA9UHW6 222 aaKnown RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 PPEF2O14830 753 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 DDX3YO15523 660 aaKnown RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 CALB1P05937 261 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 MMP8P22894 467 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 RRM1P23921 792 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 LRPAP1P30533 357 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 CD52P31358 61 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 SSTR3P32745 418 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 RAB27AP51159 221 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 DNA2P51530 1060 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 PAK2Q13177 524 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 LPIN1Q14693 890 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 MESDQ14696 234 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 CNGA2Q16280 664 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 PLEKHA7Q6IQ23 1121 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 DENND1BQ6P3S1 775 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 MMGT1Q8N4V1 131 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 NOA1Q8NC60 698 aaKnown RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 SPATA4Q8NEY3 305 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 ACTRT1Q8TDG2 376 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 PPP1R10Q96QC0 940 aaKnown RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 TWNKQ96RR1 684 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 C11orf70Q9BRQ4 267 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 NT5C1AQ9BXI3 368 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 CHORDC1Q9UHD1 332 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-245ENST00000494862 PADI3Q9ULW8 664 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 PHF24Q9UPV7 400 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 GIT1Q9Y2X7 761 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 SCINQ9Y6U3 715 aa12.21□□□□□ -0.45
HDLBP-245ENST00000494862 MYH10P35580 1976 aa12.21□□□□□ -0.46
HDLBP-245ENST00000494862 CITO14578 2027 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 TMEM110-MUSTN1A8MSY1 372 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 PTGESO14684 152 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 ZNF623O75123 536 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 TUBBP07437 444 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 GHRP10912 638 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 H2AFXP16104 143 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-245ENST00000494862 COMTP21964 271 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 CTNNA2P26232 953 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 TAF6P49848 677 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 NDST1P52848 882 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 STILQ15468 1287 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 SV2CQ496J9 727 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 MMS22LQ6ZRQ5 1243 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 UNC93AQ86WB7 457 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 RASGEF1CQ8N431 466 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 WDTC1Q8N5D0 677 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 C1orf131Q8NDD1 294 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms