RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TBCBQ99426 244 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 MPHOSPH6Q99547 160 aaKnown RBP5.53□□□□□ -1.52
SMC4-224ENST00000494612 P2RX7Q99572 595 aaKnown RBP5.53□□□□□ -1.52
SMC4-224ENST00000494612 PACSIN1Q9BY11 444 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 MRPL46Q9H2W6 279 aaKnown RBP5.53□□□□□ -1.52
SMC4-224ENST00000494612 R3HDMLQ9H3Y0 253 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 DDX21Q9NR30 783 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMC4-224ENST00000494612 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMC4-224ENST00000494612 PIPSLA2A3N6 862 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 CDHR4A6H8M9 788 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 B5MCH6 92 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 DIRC3C9JPN6 131 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 PRSS23O95084 383 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 MTHFD1P11586 935 aaKnown RBP5.52□□□□□ -1.53
SMC4-224ENST00000494612 SLC7A1P30825 629 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 PIK3CGP48736 1102 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 SEC24CP53992 1094 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 CACNB3P54284 484 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 RHBDL3P58872 404 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 RNASE9P60153 205 aaKnown RBP5.52□□□□□ -1.53
SMC4-224ENST00000494612 FAM193AP78312 1265 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 GPSM2P81274 684 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 NHLH2Q02577 135 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 FOXI1Q12951 378 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 PICALMQ13492 652 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 SEMA5AQ13591 1074 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 SEM1Q6ZVN7 128 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 FAM90A1Q86YD7 464 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 SUPT20HQ8NEM7 779 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 TBC1D15Q8TC07 691 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 BRIX1Q8TDN6 353 aaKnown RBP5.52□□□□□ -1.53
SMC4-224ENST00000494612 NAA15Q9BXJ9 866 aaKnown RBP5.52□□□□□ -1.53
SMC4-224ENST00000494612 C22orf23Q9BZE7 217 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 WDCPQ9H6R7 721 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 CNNM1Q9NRU3 951 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 TPCN1Q9ULQ1 816 aa5.52□□□□□ -1.53
SMC4-224ENST00000494612 GOLIM4O00461 696 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 ZNF185O15231 689 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 MGEA5O60502 916 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 AGFG2O95081 481 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 GNAI3P08754 354 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 NPR1P16066 1061 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 CHN2P52757 468 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 SOX8P57073 446 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 GNAI1P63096 354 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 UBE4AQ14139 1066 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 PRR16Q569H4 304 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 METRNLQ641Q3 311 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 LCORLQ8N3X6 602 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 FAM98AQ8NCA5 519 aaKnown RBP5.51□□□□□ -1.53
SMC4-224ENST00000494612 SLC17A8Q8NDX2 589 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 IL17RDQ8NFM7 739 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 OR10H5Q8NGA6 315 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 ZFP28Q8NHY6 868 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 IL31RAQ8NI17 732 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 FAM167AQ96KS9 214 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 ADAM2Q99965 735 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 BRD9Q9H8M2 597 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 RSAD1Q9HA92 442 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.51□□□□□ -1.53
SMC4-224ENST00000494612 CPNE7Q9UBL6 633 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 CORO2BQ9UQ03 480 aa5.51□□□□□ -1.53
SMC4-224ENST00000494612 PRSS29PA6NIE9 313 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 DRGXA6NNA5 263 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 MARCH11A6NNE9 402 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 ZNF785A8K8V0 405 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 PROB1E7EW31 1015 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 PJA2O43164 708 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 PHGDHO43175 533 aaKnown RBP5.5□□□□□ -1.53
SMC4-224ENST00000494612 MATN4O95460 622 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 HRGP04196 525 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 GJB1P08034 283 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 IFIT2P09913 472 aaKnown RBP5.5□□□□□ -1.53
SMC4-224ENST00000494612 SLC5A1P13866 664 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 AVPR1BP47901 424 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 SUMO3P55854 103 aaPredicted RBP5.5□□□□□ -1.53
SMC4-224ENST00000494612 BRD3Q15059 726 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 PDCD4Q53EL6 469 aaKnown RBP5.5□□□□□ -1.53
SMC4-224ENST00000494612 DACT2Q5SW24 774 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 FAM102AQ5T9C2 384 aaPredicted RBP5.5□□□□□ -1.53
SMC4-224ENST00000494612 FAM43AQ8N2R8 423 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 CPEB3Q8NE35 698 aaKnown RBP5.5□□□□□ -1.53
SMC4-224ENST00000494612 IMPG2Q9BZV3 1241 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 GNL3LQ9NVN8 582 aaKnown RBP5.5□□□□□ -1.53
SMC4-224ENST00000494612 SNX13Q9Y5W8 968 aa5.5□□□□□ -1.53
SMC4-224ENST00000494612 KPNA5O15131 536 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 SLC43A1O75387 559 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 HKR1P10072 659 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 ALAS1P13196 640 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 MYF5P13349 255 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 BRAFP15056 766 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 ZKSCAN1P17029 563 aaPredicted RBP5.49□□□□□ -1.53
SMC4-224ENST00000494612 PIK3CBP42338 1070 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 GUCY1B3Q02153 619 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 HDAC1Q13547 482 aaPredicted RBP5.49□□□□□ -1.53
SMC4-224ENST00000494612 LONRF1Q17RB8 773 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 NOMO2Q5JPE7 1267 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 TSHZ3Q63HK5 1081 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 FBXO42Q6P3S6 717 aa5.49□□□□□ -1.53
SMC4-224ENST00000494612 RD3Q7Z3Z2 195 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms