RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 CXCL12P48061 93 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 PEX3P56589 373 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SF3A2Q15428 464 aaKnown RBP12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 ZNF568Q3ZCX4 644 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 XKR4Q5GH76 650 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 CYP4A22Q5TCH4 519 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 LAIR1Q6GTX8 287 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SASS6Q6UVJ0 657 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 PRR23CQ6ZRP0 262 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SV2BQ7L1I2 683 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 DAW1Q8N136 415 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 RAD54LQ92698 747 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 IRF7Q92985 503 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 UROC1Q96N76 676 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SMOC1Q9H4F8 434 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 PTPRHQ9HD43 1115 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 RMND1Q9NWS8 449 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 KCND2Q9NZV8 630 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SERTAD1Q9UHV2 236 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 RAB23Q9ULC3 237 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 TNFSF13BQ9Y275 285 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 CITO14578 2027 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 E9PMD0 336 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 K7ERI5 159 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 ABLIM1O14639 778 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 ZNF263O14978 683 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 CAVIN2O95810 425 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 RETP07949 1114 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 SDHBP21912 280 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 CDC25AP30304 524 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 NPTX2P47972 431 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 GUCY2FP51841 1108 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 ZNF445P59923 1031 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 TTC9BQ8N6N2 239 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 CELF5Q8N6W0 485 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 TRIML1Q8N9V2 468 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 DDX12PQ92771 950 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 SMARCE1Q969G3 411 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 ZNF512Q96ME7 567 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 LRRC3Q9BY71 257 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 FAM126AQ9BYI3 521 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 DNAJC25Q9H1X3 360 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 KBTBD4Q9NVX7 518 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 GTSE1Q9NYZ3 720 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 KIAA1024Q9UPX6 916 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
CSNK1E-212ENST00000494610 A0A087X0B3 334 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 ZNF197O14709 1029 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 AXIN1O15169 862 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 CPB1P15086 417 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 CCR3P51677 355 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 YARSP54577 528 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 NRLP54845 237 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 TNK2Q07912 1038 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 CAMK4Q16566 473 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 CNNM4Q6P4Q7 775 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 RTL10Q7L3V2 364 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 TMC8Q8IU68 726 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 MFSD6LQ8IWD5 586 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 FAM160A2Q8N612 972 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 NETO1Q8TDF5 533 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 BORCS6Q96GS4 357 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 PAGE5Q96GU1 130 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 PNMA5Q96PV4 448 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 GSDMAQ96QA5 445 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 TMEM209Q96SK2 561 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 MKNK1Q9BUB5 465 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 RUSC1Q9BVN2 902 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 TIPINQ9BVW5 301 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 CCDC94Q9BW85 323 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 HAPLN2Q9GZV7 340 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 SMG9Q9H0W8 520 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 GZF1Q9H116 711 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 DACH1Q9UI36 760 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 YIPF1Q9Y548 306 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 ZFYVE26Q68DK2 2539 aa12.74□□□□□ -0.37
CSNK1E-212ENST00000494610 NBEAQ8NFP9 2946 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 SYCE3A1L190 88 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 PPEF2O14830 753 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 SYN3O14994 580 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 SLC16A4O15374 487 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 EXTL3O43909 919 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 HIP1RO75146 1068 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 KCNE1P15382 129 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 KPNA1P52294 538 aaPredicted RBP12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 EFNA5P52803 228 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 RAD51AP2Q09MP3 1159 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 DUSP4Q13115 394 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 MAPK7Q13164 816 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 PON2Q15165 354 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 CSRP2Q16527 193 aa12.73□□□□□ -0.37
CSNK1E-212ENST00000494610 STX1AQ16623 288 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms