RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 AUTS2Q8WXX7 1259 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 B3GALT6Q96L58 329 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 VN1R3Q9BXE9 311 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 RBSNQ9H1K0 784 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 FAM124BQ9H5Z6 455 aaPredicted RBP8.13□□□□□ -1.11
VEGFA-214ENST00000493786 APOBEC3GQ9HC16 384 aaKnown RBP8.13□□□□□ -1.11
VEGFA-214ENST00000493786 UBE2TQ9NPD8 197 aaPredicted RBP8.13□□□□□ -1.11
VEGFA-214ENST00000493786 RTN4Q9NQC3 1192 aaKnown RBP8.13□□□□□ -1.11
VEGFA-214ENST00000493786 CHST7Q9NS84 486 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 IFNKQ9P0W0 207 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 FNIP2Q9P278 1114 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 APEX2Q9UBZ4 518 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 DAAM1Q9Y4D1 1078 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 NLRC5Q86WI3 1866 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 CHD7Q9P2D1 2997 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 LAMA3Q16787 3333 aa8.13□□□□□ -1.11
VEGFA-214ENST00000493786 C2orf71A6NGG8 1288 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 SPDYE4A6NLX3 237 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 FSCN2O14926 492 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 OAZ2O95190 189 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 EFEMP2O95967 443 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 TPM1P09493 284 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 WEE2P0C1S8 567 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 SLC9A1P19634 815 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 IGFBP6P24592 240 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 DNAJB1P25685 340 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 PON1P27169 355 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 RAP1GAPP47736 663 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 ERVFC1P60507 584 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 RAPGEF1Q13905 1077 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 SYCP1Q15431 976 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 MAPRE1Q15691 268 aaKnown RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 UVSSAQ2YD98 709 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 KIAA0319Q5VV43 1072 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 RRAGAQ7L523 313 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 UNC93AQ86WB7 457 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 GAS2L3Q86XJ1 694 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 GLYCTKQ8IVS8 523 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 MICALL1Q8N3F8 863 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 MRPL43Q8N983 215 aaKnown RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 LMO3Q8TAP4 145 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 LNX1Q8TBB1 728 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 TATDN2Q93075 761 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 JAKMIP2Q96AA8 810 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 TNIP3Q96KP6 325 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 SPAG5Q96R06 1193 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 ERGIC2Q96RQ1 377 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 CDCA3Q99618 268 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 SYT15Q9BQS2 421 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 ACBD6Q9BR61 282 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 MRPL45Q9BRJ2 306 aaKnown RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 BCO2Q9BYV7 579 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 TRIM5Q9C035 493 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 NSUN3Q9H649 340 aaKnown RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 TLE6Q9H808 572 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 PLCB1Q9NQ66 1216 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 FAM207AQ9NSI2 230 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 DDX43Q9NXZ2 648 aaKnown RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 MTRRQ9UBK8 725 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 DPP7Q9UHL4 492 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 FBXL5Q9UKA1 691 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 CDH9Q9ULB4 789 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 BARX2Q9UMQ3 279 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-214ENST00000493786 BACE2Q9Y5Z0 518 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 IRAK3Q9Y616 596 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 CDY1Q9Y6F8 540 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 KIAA1671Q9BY89 1806 aa8.12□□□□□ -1.11
VEGFA-214ENST00000493786 ATP8B3O60423 1300 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 A0A1W2PQC6 194 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 GOLGA6L3A6NEY3 463 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 HIDE1A8MVS5 230 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 GABRDO14764 452 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 TEX28O15482 410 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 TEX33O43247 280 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 LRRN2O75325 713 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 GLUD1P00367 558 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 CNPP09543 421 aaKnown RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 PDGFRBP09619 1106 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 KRT5P13647 590 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 FOSL2P15408 326 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 ELF1P32519 619 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 OR1D2P34982 312 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 IRS1P35568 1242 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 USP8P40818 1118 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 NRIP1P48552 1158 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 FXR1P51114 621 aaKnown RBP eCLIP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 NDST1P52848 882 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 CDH8P55286 799 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 SMARCB1Q12824 385 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 ARHGAP44Q17R89 818 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 SLC39A12Q504Y0 691 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 INTS6LQ5JSJ4 861 aaKnown RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 KLHDC7AQ5VTJ3 777 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 SARM1Q6SZW1 724 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 TMEM270Q6UE05 265 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 C4orf50Q6ZRC1 276 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms