RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GCNAQ96QF7 691 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 PYM1Q9BRP8 204 aaKnown RBP13.45□□□□□ -0.26
COL6A1-205ENST00000492851 FAM213AQ9BRX8 229 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 FAM126AQ9BYI3 521 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-205ENST00000492851 TNMDQ9H2S6 317 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 HEBP1Q9NRV9 189 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 PANK4Q9NVE7 773 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 OBP2AQ9NY56 170 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 A0A1W2PRU2 124 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 SOBPA7XYQ1 873 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 DPYSL4O14531 572 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 PPEF2O14830 753 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 CHADO15335 359 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
COL6A1-205ENST00000492851 CDC25CP30307 473 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 NRLP54845 237 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 SURF1Q15526 300 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 NFE2Q16621 373 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-205ENST00000492851 MGAT5BQ3V5L5 792 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 SLC39A12Q504Y0 691 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 FAM173BQ6P4H8 233 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 VITQ6UXI7 678 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 SPATA18Q8TC71 538 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 ATRIPQ8WXE1 791 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 LRRC3Q9BY71 257 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 PANK2Q9BZ23 570 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 DNAJC25Q9H1X3 360 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 ATXN3LQ9H3M9 355 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 C8orf33Q9H7E9 229 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-205ENST00000492851 KIAA1586Q9HCI6 787 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 RBAKQ9NYW8 714 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-205ENST00000492851 MTF2Q9Y483 593 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-205ENST00000492851 PCDHGA2Q9Y5H1 932 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 CACNA1HO95180 2353 aa13.44□□□□□ -0.26
COL6A1-205ENST00000492851 MYH11P35749 1972 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TRIP11Q15643 1979 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 HEPACAM2A8MVW5 462 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TISP43B9A030 160 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 SPTLC2O15270 562 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 EXTL3O43909 919 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 HUS1O60921 280 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 VNN2O95498 520 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 CD72P21854 359 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 VIPR2P41587 438 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 RBP5P82980 135 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TFAMQ00059 246 aaKnown RBP13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TSPY1Q01534 308 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 FCHO2Q0JRZ9 810 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 GRM2Q14416 872 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 ARHGAP29Q52LW3 1261 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 POTEHQ6S545 545 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TMC8Q8IU68 726 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 ARID3BQ8IVW6 561 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-205ENST00000492851 BRSK2Q8IWQ3 736 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 LRRC52Q8N7C0 313 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 LINC00301Q8NCQ3 95 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 OR10T2Q8NGX3 314 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 FAM3CQ92520 227 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 SEPT5Q99719 369 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-205ENST00000492851 ACBD6Q9BR61 282 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 CRISPLD1Q9H336 500 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TASP1Q9H6P5 420 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 THG1LQ9NWX6 298 aaKnown RBP13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TBC1D7Q9P0N9 293 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 ITGA11Q9UKX5 1188 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 PIAS3Q9Y6X2 628 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 R4GN57 208 aa13.43□□□□□ -0.26
COL6A1-205ENST00000492851 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
COL6A1-205ENST00000492851 LRRN2O75325 713 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 YEATS4O95619 227 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 GJA1P17302 382 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 TARSP26639 723 aaKnown RBP13.42□□□□□ -0.26
COL6A1-205ENST00000492851 GABRR2P28476 465 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 SNRPFP62306 86 aaKnown RBP13.42□□□□□ -0.26
COL6A1-205ENST00000492851 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 MYL7Q01449 175 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 CSTF1Q05048 431 aaKnown RBP13.42□□□□□ -0.26
COL6A1-205ENST00000492851 KCNA1Q09470 495 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 MYO1EQ12965 1108 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 WSCD1Q658N2 575 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 DPH6Q7L8W6 267 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 EFCAB13Q8IY85 973 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 MAML2Q8IZL2 1156 aaPredicted RBP13.42□□□□□ -0.26
COL6A1-205ENST00000492851 GPD1LQ8N335 351 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
COL6A1-205ENST00000492851 RUBCNQ92622 972 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 SECISBP2LQ93073 1101 aaKnown RBP13.42□□□□□ -0.26
COL6A1-205ENST00000492851 SNX21Q969T3 373 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 ZSCAN32Q9NX65 697 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 AGAP1Q9UPQ3 857 aa13.42□□□□□ -0.26
COL6A1-205ENST00000492851 ZNF233A6NK53 670 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 CUTAO60888 179 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 ITGB3P05106 788 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 HAPLN1P10915 354 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-205ENST00000492851 DDX6P26196 483 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL6A1-205ENST00000492851 LHX1P48742 406 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms