RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 MAPK6Q16659 721 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 KIAA0753Q2KHM9 967 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 CCDC57Q2TAC2 916 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 CERKLQ49MI3 558 aaPredicted RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 AXDND1Q5T1B0 1012 aaPredicted RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 BEND3Q5T5X7 828 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 FAM102BQ5T8I3 360 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 PMS2CLQ68D20 193 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 CDPF1Q6NVV7 123 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 PKN3Q6P5Z2 889 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 GALNT15Q8N3T1 639 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 PI4KAP1Q8N8J0 262 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 CHST13Q8NET6 341 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 THAP3Q8WTV1 239 aaPredicted RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 TGFBRAP1Q8WUH2 860 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 SLC6A18Q96N87 628 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 GTPBP2Q9BX10 602 aaKnown RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 NUSAP1Q9BXS6 441 aaKnown RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 RAVER2Q9HCJ3 691 aaKnown RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 A1CFQ9NQ94 594 aaKnown RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 SUCOQ9UBS9 1254 aaKnown RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 AP4E1Q9UPM8 1137 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 INVSQ9Y283 1065 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 SLC12A7Q9Y666 1083 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 EPPK1P58107 5090 aaKnown RBP4.72□□□□□ -1.65
UBR4-215ENST00000492606 FLT1P17948 1338 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 PHLPP2Q6ZVD8 1323 aa4.72□□□□□ -1.65
UBR4-215ENST00000492606 INPPL1O15357 1258 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 NADKO95544 446 aaPredicted RBP4.71□□□□□ -1.66
UBR4-215ENST00000492606 MAP4K4O95819 1239 aaPredicted RBP4.71□□□□□ -1.66
UBR4-215ENST00000492606 NOS3P29474 1203 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 SHMT1P34896 483 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 ASPAP45381 313 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 CLCN4P51793 760 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 CLDN6P56747 220 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 SLC7A5Q01650 507 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 MYO1EQ12965 1108 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 NCAPHQ15003 741 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 SMTNL2Q2TAL5 461 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 MTERF2Q49AM1 385 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 KCNT2Q6UVM3 1135 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 KSR2Q6VAB6 950 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 LRRC55Q6ZSA7 311 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 DYMQ7RTS9 669 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 NAXDQ8IW45 347 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 LINC01465Q8N7H1 131 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 CYB5D2Q8WUJ1 264 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 SMG7Q92540 1137 aaKnown RBP4.71□□□□□ -1.66
UBR4-215ENST00000492606 EZH1Q92800 747 aaPredicted RBP4.71□□□□□ -1.66
UBR4-215ENST00000492606 FAM46AQ96IP4 442 aaKnown RBP4.71□□□□□ -1.66
UBR4-215ENST00000492606 CCDC74BQ96LY2 380 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 LGMNQ99538 433 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 PHF20Q9BVI0 1012 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 PCGF6Q9BYE7 350 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 RHOBTB2Q9BYZ6 727 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 ZBP1Q9H171 429 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 VCPKMTQ9H867 229 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 CABP5Q9NP86 173 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 ENAMQ9NRM1 1142 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 HOMER2Q9NSB8 354 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 ABCF2Q9UG63 623 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 MKL2Q9ULH7 1088 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 NOTCH4Q99466 2003 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 MYH1P12882 1939 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 PDCD11Q14690 1871 aaKnown RBP4.71□□□□□ -1.66
UBR4-215ENST00000492606 RAD50Q92878 1312 aa4.71□□□□□ -1.66
UBR4-215ENST00000492606 A0A1W2PQU0 124 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 ANO9A1A5B4 782 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 ATP2A1O14983 1001 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 SEMA7AO75326 666 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 GJB3O75712 270 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 LRIG2O94898 1065 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 SLITRK5O94991 958 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 ZNF286BP0CG31 522 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 STAG3L1P0CL83 205 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 LAG3P18627 525 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 BCKDHBP21953 392 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 AFMP43652 599 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 YARSP54577 528 aaKnown RBP4.7□□□□□ -1.66
UBR4-215ENST00000492606 UCNP55089 124 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 KLRC3Q07444 240 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 IFRD2Q12894 506 aaPredicted RBP4.7□□□□□ -1.66
UBR4-215ENST00000492606 RTP5Q14D33 572 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 GNPTABQ3T906 1256 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 METTL24Q5JXM2 366 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 TDRD10Q5VZ19 366 aaKnown RBP4.7□□□□□ -1.66
UBR4-215ENST00000492606 ANKRD34AQ69YU3 496 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 SLC23A3Q6PIS1 610 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 FAM214BQ7L5A3 538 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 DHX37Q8IY37 1157 aaKnown RBP4.7□□□□□ -1.66
UBR4-215ENST00000492606 SMYD4Q8IYR2 804 aaPredicted RBP4.7□□□□□ -1.66
UBR4-215ENST00000492606 ARMC10Q8N2F6 343 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 MINDY1Q8N5J2 469 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 KISS1RQ969F8 398 aaPredicted RBP4.7□□□□□ -1.66
UBR4-215ENST00000492606 FAM20AQ96MK3 541 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 SPATA9Q9BWV2 254 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 LGR4Q9BXB1 951 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 STK31Q9BXU1 1019 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 KLHL25Q9H0H3 589 aa4.7□□□□□ -1.66
UBR4-215ENST00000492606 SEMA6CQ9H3T2 930 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms