RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PAX3P23760 479 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 TFAMQ00059 246 aaKnown RBP18.64■□□□□ 0.57
SGMS1-204ENST00000492601 POU5F1Q01860 360 aaKnown RBP18.64■□□□□ 0.57
SGMS1-204ENST00000492601 WSCD1Q658N2 575 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 VITQ6UXI7 678 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 TMC8Q8IU68 726 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 ZSCAN18Q8TBC5 510 aaPredicted RBP18.64■□□□□ 0.57
SGMS1-204ENST00000492601 FAM84AQ96KN4 292 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 ZNF396Q96N95 335 aaPredicted RBP18.64■□□□□ 0.57
SGMS1-204ENST00000492601 TRMT61BQ9BVS5 477 aaKnown RBP18.64■□□□□ 0.57
SGMS1-204ENST00000492601 BCO2Q9BYV7 579 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 PCIF1Q9H4Z3 704 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 LTB4R2Q9NPC1 389 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 DSEQ9UL01 958 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 R4GN57 208 aa18.64■□□□□ 0.57
SGMS1-204ENST00000492601 GDI1P31150 447 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-204ENST00000492601 SV2CQ496J9 727 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 STXBP5Q5T5C0 1151 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-204ENST00000492601 GPIHBP1Q8IV16 184 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 BRSK2Q8IWQ3 736 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 CCDC65Q8IXS2 484 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 THEM5Q8N1Q8 247 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 SEPT5Q99719 369 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-204ENST00000492601 CBWD1Q9BRT8 395 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 ZCWPW1Q9H0M4 648 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 ZNF334Q9HCZ1 680 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-204ENST00000492601 SPATA6Q9NWH7 488 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-204ENST00000492601 RBAKQ9NYW8 714 aaPredicted RBP18.63■□□□□ 0.57
SGMS1-204ENST00000492601 FRYLO94915 3013 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 NCANO14594 1321 aa18.63■□□□□ 0.57
SGMS1-204ENST00000492601 OTOGLQ3ZCN5 2332 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 KPNA7A9QM74 516 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 SP9P0CG40 484 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 PSMC3P17980 439 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 GARTP22102 1010 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 TARSP26639 723 aaKnown RBP18.62■□□□□ 0.57
SGMS1-204ENST00000492601 POLR2BP30876 1174 aaKnown RBP18.62■□□□□ 0.57
SGMS1-204ENST00000492601 ALCAMQ13740 583 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 DNAJB7Q7Z6W7 309 aaPredicted RBP18.62■□□□□ 0.57
SGMS1-204ENST00000492601 NT5DC4Q86YG4 428 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 GLIS3Q8NEA6 775 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 FAM200AQ8TCP9 573 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 DNASE1L2Q92874 299 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 IRF7Q92985 503 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 HPS3Q969F9 1004 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 BORCS6Q96GS4 357 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 ZNF560Q96MR9 790 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 LPIN3Q9BQK8 851 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 AGAP1Q9UPQ3 857 aa18.62■□□□□ 0.57
SGMS1-204ENST00000492601 PPP6R2O75170 966 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 LDHAP00338 332 aaKnown RBP18.61■□□□□ 0.57
SGMS1-204ENST00000492601 ITGB3P05106 788 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 E2F4Q16254 413 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 MGAT5BQ3V5L5 792 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 SCARA3Q6AZY7 606 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 ZNF852Q6ZMS4 543 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 LRRTM3Q86VH5 581 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 KCNG4Q8TDN1 519 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 SNX21Q969T3 373 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 PSMG2Q969U7 264 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 DHX58Q96C10 678 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 RSPRY1Q96DX4 576 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 OSBPL6Q9BZF3 934 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 GPR88Q9GZN0 384 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 ATXN3LQ9H3M9 355 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 TRPV4Q9HBA0 871 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 PDE11AQ9HCR9 933 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 ASB3Q9Y575 518 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 ATG2BQ96BY7 2078 aa18.61■□□□□ 0.57
SGMS1-204ENST00000492601 SHISA7A6NL88 538 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 HEPACAM2A8MVW5 462 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 EXTL3O43909 919 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 GABRR2P28476 465 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 TUFMP49411 452 aaKnown RBP18.6■□□□□ 0.57
SGMS1-204ENST00000492601 GAREM2Q75VX8 874 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 ITIH5Q86UX2 942 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 MFSD6LQ8IWD5 586 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 MAML2Q8IZL2 1156 aaPredicted RBP18.6■□□□□ 0.57
SGMS1-204ENST00000492601 ADSSL1Q8N142 457 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 C1orf127Q8N9H9 656 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 CACTINQ8WUQ7 758 aaKnown RBP18.6■□□□□ 0.57
SGMS1-204ENST00000492601 TNMDQ9H2S6 317 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 TMEM206Q9H813 350 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 ABI2Q9NYB9 513 aaPredicted RBP18.6■□□□□ 0.57
SGMS1-204ENST00000492601 HSFX1Q9UBD0 423 aa18.6■□□□□ 0.57
SGMS1-204ENST00000492601 NDRG2Q9UN36 371 aaKnown RBP18.6■□□□□ 0.57
SGMS1-204ENST00000492601 MRPS17Q9Y2R5 130 aaKnown RBP18.6■□□□□ 0.57
SGMS1-204ENST00000492601 GREB1Q4ZG55 1949 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 ANAPC1Q9H1A4 1944 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 ZNF263O14978 683 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 LAMTOR5O43504 91 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 CUTAO60888 179 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 YEATS4O95619 227 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 HSP90AA1P07900 732 aaKnown RBP18.59■□□□□ 0.57
SGMS1-204ENST00000492601 KRT19P08727 400 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 ATF6P18850 670 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 PNPLA4P41247 253 aa18.59■□□□□ 0.57
SGMS1-204ENST00000492601 ASIC1P78348 528 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms