RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 KIAA1524Q8TCG1 905 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CALN1Q9BXU9 219 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 KIF9Q9HAQ2 790 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ALG13Q9NP73 1137 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 UBN1Q9NPG3 1134 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CISHQ9NSE2 258 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CEP72Q9P209 647 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 FEZ2Q9UHY8 353 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 NAGPAQ9UK23 515 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 JRKLQ9Y4A0 524 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 DDX60LQ5H9U9 1706 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ARL5CA6NH57 179 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 GRXCR1A8MXD5 290 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ATMINO43313 823 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CHRNA1P02708 482 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FTLP02792 175 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 BDNFP23560 247 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 OR1D2P34982 312 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PNPLA4P41247 253 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 VPS41P49754 854 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FXR1P51114 621 aaKnown RBP eCLIP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CLCNKBP51801 687 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 NDST1P52848 882 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 EHHADHQ08426 723 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ITKQ08881 620 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 GOLGA7BQ2TAP0 167 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CYP4A22Q5TCH4 519 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.74□□□□□ -1.651e-6■■■□□ 15.9
TRA2B-215ENST00000492417 LMNTD2Q8IXW0 634 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 VPS52Q8N1B4 723 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 RYBPQ8N488 228 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CRYGNQ8WXF5 182 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SLC35C1Q96A29 364 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 DDX27Q96GQ7 796 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ZNF333Q96JL9 665 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CHP1Q99653 195 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SYT15Q9BQS2 421 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TRIM31Q9BZY9 425 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SMYD3Q9H7B4 428 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FAM204AQ9H8W3 233 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SMPD4Q9NXE4 827 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SEPT10Q9P0V9 454 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 IMPACTQ9P2X3 320 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TRAF3IP3Q9Y228 551 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PTPRZ1P23471 2315 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TCHHQ07283 1943 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 LRRC37AA6NMS7 1700 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 A0A0B4J269 797 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 A6NNZ2 444 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ENC1O14682 589 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SERPING1P05155 500 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CKMP06732 381 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FAM200BP0CF97 657 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PSMA2P25787 234 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PON1P27169 355 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SOX5P35711 763 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PEX19P40855 299 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 LIG3P49916 1009 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TUBB8Q3ZCM7 444 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SEL1L2Q5TEA6 688 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 MMS22LQ6ZRQ5 1243 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PPFIBP2Q8ND30 876 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 C1orf131Q8NDD1 294 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 HSPH1Q92598 858 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FAM81BQ96LP2 452 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FERMT1Q9BQL6 677 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 MRPL17Q9NRX2 175 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 LIMA1Q9UHB6 759 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 BAIAP2L1Q9UHR4 511 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ANAPC7Q9UJX3 599 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TLDC2A0PJX2 215 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 GOLGA6CA6NDK9 693 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CREB3O43889 395 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 BUB1BO60566 1050 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 MFAP3LO75121 409 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FTCDO95954 541 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CST3P01034 146 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 GOLGA6DP0CG33 693 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 GRM5P41594 1212 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 NDUFV1P49821 464 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SNRPFP62306 86 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TUSC3Q13454 348 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 MTF1Q14872 753 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 RBBP5Q15291 538 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 HADHQ16836 314 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 KLHDC7AQ5VTJ3 777 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CC2D1AQ6P1N0 951 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PSRC1Q6PGN9 363 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 C4orf50Q6ZRC1 276 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ECHDC2Q86YB7 292 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 NPAS4Q8IUM7 802 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ARHGEF19Q8IW93 802 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 LRRC8AQ8IWT6 810 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 LRRC43Q8N309 656 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TMEM130Q8N3G9 435 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ERLEC1Q96DZ1 483 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CABS1Q96KC9 395 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 IFT122Q9HBG6 1241 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CHST12Q9NRB3 414 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms