RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZNF658Q5TYW1 1059 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 SCARA3Q6AZY7 606 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 LLGL2Q6P1M3 1020 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 DCLRE1AQ6PJP8 1040 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 EHBP1Q8NDI1 1231 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 ATXN2LQ8WWM7 1075 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 FAM84AQ96KN4 292 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 KLHL5Q96PQ7 755 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 BARX2Q9UMQ3 279 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 RRP15Q9Y3B9 282 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 EPN1Q9Y6I3 576 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 C5orf42Q9H799 3197 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 MTCL1Q9Y4B5 1905 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 SCN1AP35498 2009 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 TMEM189-UBE2V1I3L0A0 370 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 PODXLO00592 558 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 CLIC2O15247 247 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 N4BP1O75113 896 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 B3GAT3O94766 335 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 MYL1P05976 194 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 CNPP09543 421 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 BMP1P13497 986 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 MRPS5P82675 430 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 DSG1Q02413 1049 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 CLUL1Q15846 466 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 BMT2Q1RMZ1 405 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 C10orf67Q8IYJ2 551 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 NOA1Q8NC60 698 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 OR8K1Q8NGG5 319 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 FEZF2Q8TBJ5 459 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 MSLNLQ96KJ4 702 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 UROC1Q96N76 676 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 EXOC1Q9NV70 894 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 SLC38A7Q9NVC3 462 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 TAB2Q9NYJ8 693 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 VCANP13611 3396 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 PPEF2O14830 753 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 RHOBTB3O94955 611 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 GLUD2P49448 558 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 UBXN1Q04323 297 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 PSMD2Q13200 908 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 LEXMQ3ZCV2 418 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 FAM171A1Q5VUB5 890 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 PRSS55Q6UWB4 352 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 STXBP4Q6ZWJ1 553 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 TRAPPC11Q7Z392 1133 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 EFCAB13Q8IY85 973 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 SLC22A17Q8WUG5 538 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 NELFBQ8WX92 580 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 PPP2R3CQ969Q6 453 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 MRPL17Q9NRX2 175 aaKnown RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 AGPAT3Q9NRZ7 376 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 GUCA1BQ9UMX6 200 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 HCFC2Q9Y5Z7 792 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 SF3B1O75533 1304 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■■■■■ 112.6
BRCA1-219ENST00000491747 UBE4BO95155 1302 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 NCK2O43639 380 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 EXTL3O43909 919 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 ABL1P00519 1130 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 EPCAMP16422 314 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 RPL17P18621 184 aaKnown RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 NDUFV1P49821 464 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 CKAP4Q07065 602 aaKnown RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 KNOP1Q1ED39 458 aaKnown RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 USP41Q3LFD5 358 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 TMEM184AQ6ZMB5 413 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 CEP57Q86XR8 500 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 NOC3LQ8WTT2 800 aaKnown RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 RIN2Q8WYP3 895 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 CDCA3Q99618 268 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 RXFP1Q9HBX9 757 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 HSPBP1Q9NZL4 362 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 LUC7L2Q9Y383 392 aaKnown RBP10.09□□□□□ -0.79
BRCA1-219ENST00000491747 SAR1BQ9Y6B6 198 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 TSC2P49815 1807 aa10.09□□□□□ -0.79
BRCA1-219ENST00000491747 A0A1W2PQC6 194 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 LRRIQ3A6PVS8 624 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 VGLL3A8MV65 326 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 TEX28O15482 410 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 URODP06132 367 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 TKTP29401 623 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 LRPAP1P30533 357 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 RPL9P32969 192 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 AARSP49588 968 aaKnown RBP eCLIP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 KRT83P78385 493 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 CBWD2Q8IUF1 395 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 GLYCTKQ8IVS8 523 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 BRSK2Q8IWQ3 736 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 CD302Q8IX05 232 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 GPD1LQ8N335 351 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 LNX1Q8TBB1 728 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 KCTD10Q9H3F6 313 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 ASB7Q9H672 318 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 FAM204AQ9H8W3 233 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 STK39Q9UEW8 545 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 LCMT1Q9UIC8 334 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 UBQLN1Q9UMX0 589 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 MAPK8IP1Q9UQF2 711 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms