RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SNW1Q13573 536 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 CWF19L1Q69YN2 538 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 CNNM4Q6P4Q7 775 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 ZC3H14Q6PJT7 736 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 CRELD2Q6UXH1 353 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 UNC13DQ70J99 1090 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 GOLGA5Q8TBA6 731 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 SPATA18Q8TC71 538 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 DNASE1L2Q92874 299 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 OSBPL6Q9BZF3 934 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 CEP72Q9P209 647 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 USP25Q9UHP3 1055 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 RCOR1Q9UKL0 485 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 SLC27A5Q9Y2P5 690 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 PCDHB5Q9Y5E4 795 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 MTCL1Q9Y4B5 1905 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 A0A087X0B3 334 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 GOLGA8IPA6NC78 632 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 GOLGA8JA6NMD2 632 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 ZNF263O14978 683 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 KIF20AO95235 890 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 ITGB3P05106 788 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 PSMC3P17980 439 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 PCSK1P29120 753 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 EPHA5P54756 1037 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 KCNA1Q09470 495 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 UBXN2BQ14CS0 331 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 ANGPT1Q15389 498 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 SLC5A9Q2M3M2 681 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 PRSS36Q5K4E3 855 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 C1orf228Q6PIY5 440 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 SHC4Q6S5L8 630 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 ATAD1Q8NBU5 361 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 ZSCAN18Q8TBC5 510 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 CSGALNACT1Q8TDX6 532 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 PSMG2Q969U7 264 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 CBWD1Q9BRT8 395 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 RPP25Q9BUL9 199 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 ZCWPW1Q9H0M4 648 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 ATXN3LQ9H3M9 355 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 SEMA4AQ9H3S1 761 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 PCDHA7Q9UN72 937 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 PDCD11Q14690 1871 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 DENND4AQ7Z401 1863 aa17.83■□□□□ 0.44
PDLIM2-217ENST00000491330 PPEF2O14830 753 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 SPTLC1O15269 473 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 PI15O43692 258 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 CASP5P51878 434 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 RPL10AP62906 217 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 PPP2R5DQ14738 602 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 MAPRE1Q15691 268 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 E2F4Q16254 413 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 FAM78AQ5JUQ0 283 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 WSCD1Q658N2 575 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 DPH6Q7L8W6 267 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 DNAJB7Q7Z6W7 309 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 ST13P5Q8NFI4 369 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 NKD2Q969F2 451 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 BORCS6Q96GS4 357 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 SPATA32Q96LK8 384 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 ASB16Q96NS5 453 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 ACBD6Q9BR61 282 aa17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 THG1LQ9NWX6 298 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-217ENST00000491330 FAM170BA6NMN3 283 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 GFRA3O60609 400 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 CLSTN1O94985 981 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 MYL1P05976 194 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 TNNI1P19237 187 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 AFMP43652 599 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 NUCB2P80303 420 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 TEAD2Q15562 447 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 RESP18Q5W5W9 173 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 TANGO2Q6ICL3 276 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 EFCAB13Q8IY85 973 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 HS6ST3Q8IZP7 471 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 TOP6BLQ8N6T0 577 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 PJA1Q8NG27 643 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 TCEAL4Q96EI5 215 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 MSANTD3Q96H12 275 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 PDE11AQ9HCR9 933 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 EXOC1Q9NV70 894 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 FAM86C1Q9NVL1 165 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 ABI2Q9NYB9 513 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 HSPBP1Q9NZL4 362 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 SNX9Q9Y5X1 595 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 MYO10Q9HD67 2058 aa17.81■□□□□ 0.44
PDLIM2-217ENST00000491330 TCHHQ07283 1943 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 ZDBF2Q9HCK1 2354 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 A0A1W2PRU2 124 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 LAMTOR5O43504 91 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 SLFN14P0C7P3 912 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 GLULP15104 373 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 TRIM21P19474 475 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 GDI1P31150 447 aa17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 DNM1Q05193 864 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-217ENST00000491330 PSMD2Q13200 908 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms