RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 BARX2Q9UMQ3 279 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-230ENST00000491028 CNTN6Q9UQ52 1028 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 YBX2Q9Y2T7 364 aaKnown RBP19.91■□□□□ 0.78
MCF2L-230ENST00000491028 PLXNA4Q9HCM2 1894 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 AKR1B15C9JRZ8 316 aaPredicted RBP19.9■□□□□ 0.78
MCF2L-230ENST00000491028 GABRDO14764 452 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 MFAP3LO75121 409 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 CILPO75339 1184 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 FGF18O76093 207 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 SOD2P04179 222 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 CD58P19256 250 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 LHX1P48742 406 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 CDH8P55286 799 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 ARID5BQ14865 1188 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 FAM171A1Q5VUB5 890 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 WSCD1Q658N2 575 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 SPC24Q8NBT2 197 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 CPLX3Q8WVH0 158 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 PDLIM2Q96JY6 352 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 MRPL45Q9BRJ2 306 aaKnown RBP19.9■□□□□ 0.78
MCF2L-230ENST00000491028 SNX25Q9H3E2 840 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 PCDHB4Q9Y5E5 795 aa19.9■□□□□ 0.78
MCF2L-230ENST00000491028 LRRC53A6NM62 1247 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 TKTP29401 623 aaKnown RBP19.89■□□□□ 0.77
MCF2L-230ENST00000491028 KRT9P35527 623 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 SOX5P35711 763 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 PBX2P40425 430 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 ERVK-21P61565 698 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 TAP1Q03518 808 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 YWHAHQ04917 246 aaPredicted RBP19.89■□□□□ 0.77
MCF2L-230ENST00000491028 USP41Q3LFD5 358 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 TMEM270Q6UE05 265 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 FAM71AQ8IYT1 594 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 KLHL23Q8NBE8 558 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 OR6B3Q8NGW1 331 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 SYN2Q92777 582 aaPredicted RBP19.89■□□□□ 0.77
MCF2L-230ENST00000491028 C17orf80Q9BSJ5 609 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 TTPALQ9BTX7 342 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 LZTS1Q9Y250 596 aa19.89■□□□□ 0.77
MCF2L-230ENST00000491028 A8MXQ7 604 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 RNF225M0QZC1 329 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-230ENST00000491028 FOXN3O00409 490 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-230ENST00000491028 ARHGEF15O94989 841 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 CCDC172P0C7W6 258 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 KRT5P13647 590 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 ZNF132P52740 706 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 NDST1P52848 882 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 GSDMDP57764 484 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 UBE3AQ05086 875 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 CCDC173Q0VFZ6 552 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 SFMBT2Q5VUG0 894 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 OVOS1Q6IE37 1185 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 GPR65Q8IYL9 337 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 THEM5Q8N1Q8 247 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 RBBP8NLQ8NC74 664 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-230ENST00000491028 DNAJC7Q99615 494 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 C11orf84Q9BUA3 381 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-230ENST00000491028 VN1R3Q9BXE9 311 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 NT5C1AQ9BXI3 368 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 OXCT2Q9BYC2 517 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-230ENST00000491028 NKX2-4Q9H2Z4 354 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 CHST7Q9NS84 486 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 ABHD10Q9NUJ1 306 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 AIPL1Q9NZN9 384 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 PUF60Q9UHX1 559 aaKnown RBP19.88■□□□□ 0.77
MCF2L-230ENST00000491028 STXBP5LQ9Y2K9 1186 aa19.88■□□□□ 0.77
MCF2L-230ENST00000491028 TIMM13Q9Y5L4 95 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-230ENST00000491028 H7C4K7 107 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 OAZ2O95190 189 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 PAEPP09466 180 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 FERP16591 822 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 DNAJB2P25686 324 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 PCSK1P29120 753 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 GNL1P36915 607 aaPredicted RBP19.87■□□□□ 0.77
MCF2L-230ENST00000491028 USP8P40818 1118 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 GLUD2P49448 558 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 BPIFB4P59827 614 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 MRPL58Q14197 206 aaKnown RBP19.87■□□□□ 0.77
MCF2L-230ENST00000491028 VARS2Q5ST30 1063 aaKnown RBP19.87■□□□□ 0.77
MCF2L-230ENST00000491028 PPP2R2DQ66LE6 453 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 ZNF280DQ6N043 979 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 ANKS3Q6ZW76 656 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 OSTM1Q86WC4 334 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 CEP57Q86XR8 500 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 OR8K1Q8NGG5 319 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 WHAMMQ8TF30 809 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 PIK3R5Q8WYR1 880 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 TNIP3Q96KP6 325 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 SLC28A3Q9HAS3 691 aa19.87■□□□□ 0.77
MCF2L-230ENST00000491028 DDX43Q9NXZ2 648 aaKnown RBP19.87■□□□□ 0.77
MCF2L-230ENST00000491028 GFPT2O94808 682 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 HNRNPH3P31942 346 aaKnown RBP19.86■□□□□ 0.77
MCF2L-230ENST00000491028 DSG1Q02413 1049 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 TSR1Q2NL82 804 aaKnown RBP19.86■□□□□ 0.77
MCF2L-230ENST00000491028 LRIT3Q3SXY7 679 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 RTP2Q5QGT7 225 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 TC2NQ8N9U0 490 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 TMEM176AQ96HP8 235 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 ACBD6Q9BR61 282 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 HMGXB4Q9UGU5 601 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms