RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
SHOX2-205ENST00000490689 ZNF570Q96NI8 536 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 KLC2Q9H0B6 622 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 SLITRK3O94933 977 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 CALB1P05937 261 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 FGRP09769 529 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 ATP6V1C1P21283 382 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 IYDQ6PHW0 289 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 FBXO28Q9NVF7 368 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 AGO2Q9UKV8 859 aaKnown RBP13.47□□□□□ -0.25
SHOX2-205ENST00000490689 SLC12A4Q9UP95 1085 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 C2orf71A6NGG8 1288 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 PIK3CDO00329 1044 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 GRAP2O75791 330 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 GSTA2P09210 222 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 KRT3P12035 628 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 SLC12A2P55011 1212 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 SESN2P58004 480 aaPredicted RBP13.47□□□□□ -0.25
SHOX2-205ENST00000490689 ROR1Q01973 937 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 MTMR2Q13614 643 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 COBLL1Q53SF7 1204 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 ZDHHC24Q6UX98 284 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 CYP4X1Q8N118 509 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 RNF217Q8TC41 542 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 ADPGKQ9BRR6 497 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 KIAA1586Q9HCI6 787 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 LRRC4CQ9HCJ2 640 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 TMEM8AQ9HCN3 771 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 DDX18Q9NVP1 670 aaKnown RBP13.47□□□□□ -0.25
SHOX2-205ENST00000490689 GRHL1Q9NZI5 618 aa13.47□□□□□ -0.25
SHOX2-205ENST00000490689 KCNN4O15554 427 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 ESRRGP62508 458 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 SPDYCQ5MJ68 293 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 RNF43Q68DV7 783 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 SV2AQ7L0J3 742 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 FEZF2Q8TBJ5 459 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 ALKBH8Q96BT7 664 aaKnown RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 DENND2DQ9H6A0 471 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 NMRK1Q9NWW6 199 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 ADA2Q9NZK5 511 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 SCAF8Q9UPN6 1271 aaKnown RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 R3HDM2Q9Y2K5 976 aaKnown RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 BCAR1P56945 870 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 YWHAEP62258 255 aaKnown RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 IGBP1P78318 339 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 CCNG2Q16589 344 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 DNAL1Q4LDG9 190 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 IRGCQ6NXR0 463 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 SUDS3Q9H7L9 328 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 SPDYE5A6NIY4 337 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 TMEM259Q4ZIN3 620 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 RNF34Q969K3 372 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 THEGQ9P2T0 379 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.25
SHOX2-205ENST00000490689 NKX1-2Q9UD57 310 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-205ENST00000490689 H0YCG3 227 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 PDE5AO76074 875 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 PSMG1O95456 288 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 KRT7P08729 469 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 TYK2P29597 1187 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 GSTT1P30711 240 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 PSEN1P49768 467 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 RPS6KA2Q15349 733 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 ARHGAP22Q7Z5H3 698 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 TMEM143Q96AN5 459 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 SERPINI1Q99574 410 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 ZDHHC18Q9NUE0 388 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 TMEM59LQ9UK28 342 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 MYH2Q9UKX2 1941 aa13.46□□□□□ -0.26
SHOX2-205ENST00000490689 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 XPO1O14980 1071 aaKnown RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 PROSCO94903 275 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ENO3P13929 434 aaPredicted RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 GARSP41250 739 aaKnown RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 PRAMEP78395 509 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 FAM102AQ5T9C2 384 aaPredicted RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 MFSD7Q6UXD7 560 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ENOSF1Q7L5Y1 443 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 OTOAQ7RTW8 1153 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 PYDC1Q8WXC3 89 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 PCDHB18PQ96TA0 734 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ZNF184Q99676 751 aaPredicted RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 FHDC1Q9C0D6 1143 aaPredicted RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 MIS12Q9H081 205 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 TRPV6Q9H1D0 765 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 NID2Q14112 1375 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 EEF1B2P24534 225 aaKnown RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms