RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CCL26Q9Y258 94 aa15□□□□□ -0.01
EXOSC3-207ENST00000490516 OBSL1O75147 1896 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 ZNF462Q96JM2 2506 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 CFAP46Q8IYW2 2715 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 ANTXRLA6NF34 631 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 TNFRSF10BO14763 440 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 OPHN1O60890 802 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 FTH1P19P0C7X4 201 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 ATXN3P54252 364 aaPredicted RBP14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 TRIP6Q15654 476 aaKnown RBP14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 MAPK6Q16659 721 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 DCAF4L1Q3SXM0 396 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 PPP4R3AQ6IN85 833 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 LPCAT2Q7L5N7 544 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 ZNF605Q86T29 641 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 TTC30AQ86WT1 665 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 LURAP1LQ8IV03 231 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 TTC9BQ8N6N2 239 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 CEP120Q8N960 986 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 PIGOQ8TEQ8 1089 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 BSNDQ8WZ55 320 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 PSMG2Q969U7 264 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 ZMAT2Q96NC0 199 aaKnown RBP14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 TBC1D32Q96NH3 1257 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 FNBP1Q96RU3 617 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 EIF2AK1Q9BQI3 630 aaKnown RBP14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 SLC46A2Q9BY10 475 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 CCDC113Q9H0I3 377 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 TBX20Q9UMR3 447 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 RAI2Q9Y5P3 530 aa14.99□□□□□ -0.01
EXOSC3-207ENST00000490516 HELZP42694 1942 aaKnown RBP14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 ACKR2O00590 384 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 MARCH6O60337 910 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 LYPLA2O95372 231 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 CPA1P15085 419 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 MCM4P33991 863 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 GJA4P35212 333 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 OSTNP61366 133 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 AMPD2Q01433 879 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 NPY5RQ15761 445 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 ALKAL1Q6UXT8 129 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 APPL2Q8NEU8 664 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 RIN3Q8TB24 985 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 C18orf25Q96B23 403 aaPredicted RBP14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 CNOT6LQ96LI5 555 aaKnown RBP14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 ANO2Q9NQ90 1003 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 TIMM13Q9Y5L4 95 aaPredicted RBP14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 MYO18BQ8IUG5 2567 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 NID2Q14112 1375 aa14.98□□□□□ -0.01
EXOSC3-207ENST00000490516 MAP3K13O43283 966 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 SH3BP5O60239 455 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 FGF19O95750 216 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 ITPKAP23677 461 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 HNRNPDQ14103 355 aaKnown RBP14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 XKR4Q5GH76 650 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 NT5DC1Q5TFE4 455 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 CENPPQ6IPU0 288 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 MINDY1Q8N5J2 469 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 ATAD1Q8NBU5 361 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 OLIG1Q8TAK6 271 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 BRF1Q92994 677 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 HSD17B14Q9BPX1 270 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 LPIN3Q9BQK8 851 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 ESYT1Q9BSJ8 1104 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 C2orf40Q9H1Z8 148 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 IL21Q9HBE4 155 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 SLC38A7Q9NVC3 462 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 PILRBQ9UKJ0 227 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 PCDHB8Q9UN66 801 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 ASB3Q9Y575 518 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 ANK1P16157 1881 aa14.97□□□□□ -0.01
EXOSC3-207ENST00000490516 HECTD1Q9ULT8 2610 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 TK2O00142 265 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 CCNT1O60563 726 aaKnown RBP14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 IFNAR1P17181 557 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 MARCKSP29966 332 aaPredicted RBP14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 P2RY2P41231 377 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 CDR1P51861 262 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 YARSP54577 528 aaKnown RBP14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 SEC13P55735 322 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 GFPT1Q06210 699 aaPredicted RBP14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 C2orf27AQ580R0 203 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 ATF7IP2Q5U623 682 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 RNF20Q5VTR2 975 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 LYSMD4Q5XG99 296 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 CMTM8Q8IZV2 173 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 USP13Q92995 863 aaPredicted RBP14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 CD101Q93033 1021 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 NCOA5Q9HCD5 579 aaKnown RBP14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 SLC6A14Q9UN76 642 aa14.96□□□□□ -0.01
EXOSC3-207ENST00000490516 MTMR11A4FU01 709 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 ATXN7O15265 892 aaPredicted RBP14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 OAZ2O95190 189 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 HNRNPLP14866 589 aaKnown RBP eCLIP14.95□□□□□ -0.021e-7■■□□□ 14
EXOSC3-207ENST00000490516 RPL9P32969 192 aaKnown RBP14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 YWHAHQ04917 246 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms