RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 NDUFA10O95299 355 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 TRIM49P0CI25 452 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 TRIM49CP0CI26 452 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 SP100P23497 879 aaPredicted RBP16.84■□□□□ 0.29
PCCB-218ENST00000490504 CYLC1P35663 651 aaPredicted RBP16.84■□□□□ 0.29
PCCB-218ENST00000490504 POLR2FP61218 127 aaKnown RBP16.84■□□□□ 0.29
PCCB-218ENST00000490504 OSTNP61366 133 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 ZNF568Q3ZCX4 644 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 GLRA4Q5JXX5 417 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 KIAA1841Q6NSI8 718 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 DPY19L2P1Q6NXN4 242 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 SYN2Q92777 582 aaPredicted RBP16.84■□□□□ 0.29
PCCB-218ENST00000490504 ZBTB45Q96K62 511 aaPredicted RBP16.84■□□□□ 0.29
PCCB-218ENST00000490504 POMKQ9H5K3 350 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 RXFP1Q9HBX9 757 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 SSX2IPQ9Y2D8 614 aa16.84■□□□□ 0.29
PCCB-218ENST00000490504 N4BP1O75113 896 aaKnown RBP16.83■□□□□ 0.28
PCCB-218ENST00000490504 KIF4AO95239 1232 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 SLC9A1P19634 815 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 PROZP22891 400 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 IGFBP6P24592 240 aaPredicted RBP16.83■□□□□ 0.28
PCCB-218ENST00000490504 GRM5P41594 1212 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 VAMP7P51809 220 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 MCCD1P59942 119 aaPredicted RBP16.83■□□□□ 0.28
PCCB-218ENST00000490504 USP41Q3LFD5 358 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 KLHDC7AQ5VTJ3 777 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 TMC5Q6UXY8 1006 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 APBB1IPQ7Z5R6 666 aaPredicted RBP16.83■□□□□ 0.28
PCCB-218ENST00000490504 ACRBPQ8NEB7 543 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 POMGNT1Q8WZA1 660 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 PPP1R10Q96QC0 940 aaKnown RBP16.83■□□□□ 0.28
PCCB-218ENST00000490504 NHEJ1Q9H9Q4 299 aaPredicted RBP16.83■□□□□ 0.28
PCCB-218ENST00000490504 NLRC4Q9NPP4 1024 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 FBXL5Q9UKA1 691 aa16.83■□□□□ 0.28
PCCB-218ENST00000490504 PIGRP01833 764 aa16.82■□□□□ 0.28
PCCB-218ENST00000490504 LIG4P49917 911 aa16.82■□□□□ 0.28
PCCB-218ENST00000490504 MYL7Q01449 175 aa16.82■□□□□ 0.28
PCCB-218ENST00000490504 SNRNP35Q16560 246 aaKnown RBP16.82■□□□□ 0.28
PCCB-218ENST00000490504 SFMBT2Q5VUG0 894 aa16.82■□□□□ 0.28
PCCB-218ENST00000490504 ALKAL1Q6UXT8 129 aa16.82■□□□□ 0.28
PCCB-218ENST00000490504 ZSWIM2Q8NEG5 633 aa16.82■□□□□ 0.28
PCCB-218ENST00000490504 RIN2Q8WYP3 895 aaPredicted RBP16.82■□□□□ 0.28
PCCB-218ENST00000490504 TCHPQ9BT92 498 aa16.82■□□□□ 0.28
PCCB-218ENST00000490504 GOLGA8IPA6NC78 632 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 GOLGA8JA6NMD2 632 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 P4HA2O15460 535 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 ADH1AP07327 375 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 ADRB2P07550 413 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 MCF2P10911 925 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 HARSP12081 509 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 UCHL3P15374 230 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 MTHFRP42898 656 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 APBA1Q02410 837 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 CBWD6Q4V339 395 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 CBWD3Q5JTY5 395 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 RTP2Q5QGT7 225 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 CBWD5Q5RIA9 395 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 MPZL3Q6UWV2 235 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 SAAL1Q96ER3 474 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 RIPOR3Q96MK2 946 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 NECTIN4Q96NY8 510 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 CCDC94Q9BW85 323 aaPredicted RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 SIX2Q9NPC8 291 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 MYO6Q9UM54 1294 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 DAAM1Q9Y4D1 1078 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 STYXL1Q9Y6J8 313 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 SMIM28A0A1B0GU29 152 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 EIF3CLB5ME19 914 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 MEFVO15553 781 aaPredicted RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 SF3B1O75533 1304 aaKnown RBP eCLIP16.81■□□□□ 0.282e-6■■■■■ 109.7
PCCB-218ENST00000490504 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 RPL17P18621 184 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 YARSP54577 528 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 ETF1P62495 437 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 KRT83P78385 493 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 ENPEPQ07075 957 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 XKR4Q5GH76 650 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 ATAT1Q5SQI0 421 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 FAM171A1Q5VUB5 890 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 TRIM65Q6PJ69 517 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 PALB2Q86YC2 1186 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 CBWD2Q8IUF1 395 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 GPD1LQ8N335 351 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 KIF18AQ8NI77 898 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 ZNF592Q92610 1267 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 CCDC42Q96M95 316 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 EIF3CQ99613 913 aaKnown RBP16.81■□□□□ 0.28
PCCB-218ENST00000490504 SFXN1Q9H9B4 322 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 KIAA1586Q9HCI6 787 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 MAN1C1Q9NR34 630 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 ARHGAP20Q9P2F6 1191 aa16.81■□□□□ 0.28
PCCB-218ENST00000490504 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 PRR33A8MZF0 331 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 TOM1L1O75674 476 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 GLUD1P00367 558 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms