RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 CEP85LQ5SZL2 805 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 DNAJC24Q6P3W2 148 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 LRRC31Q6UY01 552 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 SCARA5Q6ZMJ2 495 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 RUFY4Q6ZNE9 571 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
SNX5-214ENST00000490175 ATP6V1G3Q96LB4 118 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 CYP3A43Q9HB55 503 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 NXF1Q9UBU9 619 aaKnown RBP17.06■□□□□ 0.32
SNX5-214ENST00000490175 MTRF1LQ9UGC7 380 aaKnown RBP17.06■□□□□ 0.32
SNX5-214ENST00000490175 C2CD2Q9Y426 696 aa17.06■□□□□ 0.32
SNX5-214ENST00000490175 A0A1B0GUA9 196 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 TSPAN1O60635 241 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 CETN2P41208 172 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 RPL21P46778 160 aaKnown RBP17.05■□□□□ 0.32
SNX5-214ENST00000490175 WDR72Q3MJ13 1102 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 ZNF394Q53GI3 561 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 MARCH8Q5T0T0 291 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 LRRC38Q5VT99 294 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 ZDHHC24Q6UX98 284 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 ERICH1Q86X53 443 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 CXorf38Q8TB03 319 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 GRK7Q8WTQ7 553 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 TFAP2BQ92481 460 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 CPB2Q96IY4 423 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 PTPN18Q99952 460 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 TMBIM4Q9HC24 238 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 POLIQ9UNA4 740 aa17.05■□□□□ 0.32
SNX5-214ENST00000490175 MEFVO15553 781 aaPredicted RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 ITGB3P05106 788 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 MYZAPP0CAP1 466 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 POLR2BP30876 1174 aaKnown RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 PLTPP55058 493 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 EIF3BP55884 814 aaKnown RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 TAS2R40P59535 323 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 SLC10A6Q3KNW5 377 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 APBB1IPQ7Z5R6 666 aaPredicted RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 KIAA0319LQ8IZA0 1049 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 WDTC1Q8N5D0 677 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 C3orf20Q8ND61 904 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 SCLT1Q96NL6 688 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 ITGA11Q9UKX5 1188 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 CSDE1O75534 798 aaKnown RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 STAU1O95793 577 aaKnown RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 KLF1Q13351 362 aaPredicted RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 PIGHQ14442 188 aaPredicted RBP17.04■□□□□ 0.32
SNX5-214ENST00000490175 TMEM132DQ14C87 1099 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 DCAF4L1Q3SXM0 396 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 PPP1R15BQ5SWA1 713 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 TTC39CQ8N584 583 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 NIPA2Q8N8Q9 360 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 NPLOC4Q8TAT6 608 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 FBXO25Q8TCJ0 367 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 ACAP3Q96P50 834 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 PPP1R16BQ96T49 567 aa17.04■□□□□ 0.32
SNX5-214ENST00000490175 RAD23BP54727 409 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 RPL7AP62424 266 aaKnown RBP17.03■□□□□ 0.32
SNX5-214ENST00000490175 ZNF844Q08AG5 666 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 PCBP1Q15365 356 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■□□□□ 8.9
SNX5-214ENST00000490175 PPP1R7Q15435 360 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 DCUN1D2Q6PH85 259 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 KDM7AQ6ZMT4 941 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 CCDC50Q8IVM0 306 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 RCOR2Q8IZ40 523 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 ART4Q93070 314 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 RBM41Q96IZ5 413 aaKnown RBP17.03■□□□□ 0.32
SNX5-214ENST00000490175 CAPS2Q9BXY5 557 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 DCLK3Q9C098 648 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 WHRNQ9P202 907 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 ATP8A1Q9Y2Q0 1164 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 GAS8O95995 478 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 CD19P15391 556 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 GRM5P41594 1212 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 GSCP56915 257 aaPredicted RBP17.03■□□□□ 0.32
SNX5-214ENST00000490175 ILDR2Q71H61 639 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 C10orf67Q8IYJ2 551 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 C1orf54Q8WWF1 131 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 MCEEQ96PE7 176 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 OSBPL8Q9BZF1 889 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 PABPC3Q9H361 631 aaKnown RBP17.03■□□□□ 0.32
SNX5-214ENST00000490175 USTQ9Y2C2 406 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 PTPN22Q9Y2R2 807 aa17.03■□□□□ 0.32
SNX5-214ENST00000490175 CITO14578 2027 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 A6NJR5 290 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 CILPO75339 1184 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 NUDT17P0C025 328 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 RALAP11233 206 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 KCNJ1P48048 391 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 PMS2P54278 862 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 COPS2P61201 443 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 RBP5P82980 135 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 CALCOCO2Q13137 446 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 SLMAPQ14BN4 828 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 CCNG2Q16589 344 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 AGBL2Q5U5Z8 902 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 DENND1BQ6P3S1 775 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 ATL2Q8NHH9 583 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 PLEKHA5Q9HAU0 1116 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms