RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	HOXB8	P17481	243 aa	Predicted RBP	19.5	■□□□□ 0.71
SRM-206	ENST00000490101	AKAP5	P24588	427 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	KRT9	P35527	623 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	TMEM132D	Q14C87	1099 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	ZBTB6	Q15916	424 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	ZNF397	Q8NF99	534 aa	Predicted RBP	19.5	■□□□□ 0.71
SRM-206	ENST00000490101	BCL7C	Q8WUZ0	217 aa	Predicted RBP	19.5	■□□□□ 0.71
SRM-206	ENST00000490101	PBXIP1	Q96AQ6	731 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	PGBD4	Q96DM1	585 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	PANX2	Q96RD6	677 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	MTMR12	Q9C0I1	747 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	APEX2	Q9UBZ4	518 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	DNAJB4	Q9UDY4	337 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	PARP2	Q9UGN5	583 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	GIT1	Q9Y2X7	761 aa		19.5	■□□□□ 0.71
SRM-206	ENST00000490101	PHACTR2	O75167	634 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	RFX1	P22670	979 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	SLC11A1	P49279	550 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	ADK	P55263	362 aa	Known RBP	19.49	■□□□□ 0.71
SRM-206	ENST00000490101	POLR2F	P61218	127 aa	Known RBP	19.49	■□□□□ 0.71
SRM-206	ENST00000490101	APBA1	Q02410	837 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	NCOA4	Q13772	614 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	CES5A	Q6NT32	575 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	ALYREF	Q86V81	257 aa	Known RBP	19.49	■□□□□ 0.71
SRM-206	ENST00000490101	LRRC8A	Q8IWT6	810 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	OR8K1	Q8NGG5	319 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	URGCP	Q8TCY9	931 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	RSPH1	Q8WYR4	309 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	BAP1	Q92560	729 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	KIF12	Q96FN5	646 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	IGSF21	Q96ID5	467 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	DNAJC7	Q99615	494 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	NAA15	Q9BXJ9	866 aa	Known RBP	19.49	■□□□□ 0.71
SRM-206	ENST00000490101	ZBP1	Q9H171	429 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	MYO6	Q9UM54	1294 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	ZDBF2	Q9HCK1	2354 aa		19.49	■□□□□ 0.71
SRM-206	ENST00000490101	SMIM28	A0A1B0GU29	152 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	B4GALT3	O60512	393 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	LRRN2	O75325	713 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	GALT	P07902	379 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	WEE2	P0C1S8	567 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	PIK3CA	P42336	1068 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	NHLH1	Q02575	133 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	GOLGA8F	Q08AF8	430 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	GOLGA8DP	Q0D2H9	430 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	RARS2	Q5T160	578 aa	Known RBP	19.48	■□□□□ 0.71
SRM-206	ENST00000490101	PHLDB3	Q6NSJ2	640 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	AGMO	Q6ZNB7	445 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	CACNA2D4	Q7Z3S7	1137 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	ZNF280B	Q86YH2	543 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	C12orf76	Q8N812	135 aa	Predicted RBP	19.48	■□□□□ 0.71
SRM-206	ENST00000490101	C1orf127	Q8N9H9	656 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	ZMAT2	Q96NC0	199 aa	Known RBP	19.48	■□□□□ 0.71
SRM-206	ENST00000490101	NT5C1B	Q96P26	610 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	NUCKS1	Q9H1E3	243 aa	Known RBP	19.48	■□□□□ 0.71
SRM-206	ENST00000490101	CXCL16	Q9H2A7	254 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	UBN1	Q9NPG3	1134 aa		19.48	■□□□□ 0.71
SRM-206	ENST00000490101	CST3	P01034	146 aa	Predicted RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	FECH	P22830	423 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	HNRNPH3	P31942	346 aa	Known RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	AFF1	P51825	1210 aa	Known RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	WDR44	Q5JSH3	913 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	IQCE	Q6IPM2	695 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	PDXDC1	Q6P996	788 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	DDX53	Q86TM3	631 aa	Known RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	SUGP1	Q8IWZ8	645 aa	Known RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	CXorf38	Q8TB03	319 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	TAF4B	Q92750	862 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	TRIM44	Q96DX7	344 aa	Predicted RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	ADAM7	Q9H2U9	754 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	POMK	Q9H5K3	350 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	RSAD1	Q9HA92	442 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	NLRC4	Q9NPP4	1024 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	ABHD10	Q9NUJ1	306 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	DPP3	Q9NY33	737 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	KLK14	Q9P0G3	267 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	SIX4	Q9UIU6	781 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	DNAJC12	Q9UKB3	198 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	ITGA11	Q9UKX5	1188 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	UBQLN1	Q9UMX0	589 aa	Known RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	19.47	■□□□□ 0.71
SRM-206	ENST00000490101	FHOD1	Q9Y613	1164 aa		19.47	■□□□□ 0.71
SRM-206	ENST00000490101	TRIP11	Q15643	1979 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	CARNS1	A5YM72	827 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	XPOT	O43592	962 aa	Known RBP	19.46	■□□□□ 0.71
SRM-206	ENST00000490101	ASS1	P00966	412 aa	Known RBP	19.46	■□□□□ 0.71
SRM-206	ENST00000490101	POMC	P01189	267 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	CTSA	P10619	480 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	EPCAM	P16422	314 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	CYP3A5	P20815	502 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	SIGLEC14	Q08ET2	396 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	TRPC3	Q13507	836 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	SGSM1	Q2NKQ1	1148 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	GJB7	Q6PEY0	223 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	RRAGA	Q7L523	313 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	BMP8A	Q7Z5Y6	402 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	ARHGEF19	Q8IW93	802 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	BEST2	Q8NFU1	509 aa		19.46	■□□□□ 0.71
SRM-206	ENST00000490101	SYN2	Q92777	582 aa	Predicted RBP	19.46	■□□□□ 0.71
SRM-206	ENST00000490101	FAM81B	Q96LP2	452 aa		19.46	■□□□□ 0.71

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