RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 PRAMEF10O60809 474 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 PQBP1O60828 265 aaKnown RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 CDKL5O76039 1030 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 ABHD16AO95870 558 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 FOSP01100 380 aaPredicted RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 GRPP07492 148 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 DDX6P26196 483 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 VIPR2P41587 438 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 ANXA11P50995 505 aaKnown RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 SLC25A3Q00325 362 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 HLXQ14774 488 aaPredicted RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 PCSK9Q8NBP7 692 aaKnown RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 CPEB3Q8NE35 698 aaKnown RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 NMD3Q96D46 503 aaKnown RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 P2RX7Q99572 595 aaKnown RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 VKORC1Q9BQB6 163 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 HEPHQ9BQS7 1158 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 HSFX1Q9UBD0 423 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 AFF4Q9UHB7 1163 aaKnown RBP6.97□□□□□ -1.29
VPS26A-206ENST00000489794 USP25Q9UHP3 1055 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 TMX2Q9Y320 296 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 SPATA31A3Q5VYP0 1347 aa6.97□□□□□ -1.29
VPS26A-206ENST00000489794 AATKQ6ZMQ8 1374 aa6.96□□□□□ -1.29
VPS26A-206ENST00000489794 TBX3O15119 743 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 DNAJB5O75953 348 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 UNC5CO95185 931 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 NDUFA10O95299 355 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 MAP4K4O95819 1239 aaPredicted RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 WNT3P56703 355 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 RPS7P62081 194 aaKnown RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 BLOC1S1P78537 153 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 FAM189BP81408 668 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 RESTQ13127 1097 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 SLC13A2Q13183 592 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 IFIT5Q13325 482 aaKnown RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 B3GNTL1Q67FW5 361 aaPredicted RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 SP5Q6BEB4 398 aaPredicted RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 CELF5Q8N6W0 485 aaKnown RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 POC1BQ8TC44 478 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 PHKBQ93100 1093 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 FUBP1Q96AE4 644 aaKnown RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 ZC3H10Q96K80 434 aaKnown RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 MSLNLQ96KJ4 702 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 STRBPQ96SI9 672 aaKnown RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 SPATA5L1Q9BVQ7 753 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 TEX101Q9BY14 249 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 ALOXE3Q9BYJ1 711 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 ETAA1Q9NY74 926 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 RGS17Q9UGC6 210 aaPredicted RBP6.96□□□□□ -1.3
VPS26A-206ENST00000489794 FAM50BQ9Y247 325 aa6.96□□□□□ -1.3
VPS26A-206ENST00000489794 A0A087WWL8 130 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 KIF20AO95235 890 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 ELANEP08246 267 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 FDXRP22570 491 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 SUMO3P55854 103 aaPredicted RBP6.95□□□□□ -1.3
VPS26A-206ENST00000489794 GUCY1B3Q02153 619 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 LSM12Q3MHD2 195 aaKnown RBP6.95□□□□□ -1.3
VPS26A-206ENST00000489794 LY6G5CQ5SRR4 150 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 SPRED1Q7Z699 444 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 ARHGEF19Q8IW93 802 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 FAM46DQ8NEK8 389 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 RNF31Q96EP0 1072 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 UNKQ9C0B0 810 aaKnown RBP6.95□□□□□ -1.3
VPS26A-206ENST00000489794 CTTNBP2NLQ9P2B4 639 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 PCDHGB6Q9Y5F9 930 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 USP19O94966 1318 aa6.95□□□□□ -1.3
VPS26A-206ENST00000489794 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 RHPN2P1A8MT19 583 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 TOR1BO14657 336 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 PMM2O15305 246 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 ATXN1LP0C7T5 689 aaKnown RBP6.94□□□□□ -1.3
VPS26A-206ENST00000489794 MAKP20794 623 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 SLC11A2P49281 568 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 FMO1Q01740 532 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 DYRK1AQ13627 763 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 IQCB1Q15051 598 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 CYP2A13Q16696 494 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 LONRF3Q496Y0 759 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 MAP9Q49MG5 647 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 PREPLQ4J6C6 727 aaPredicted RBP6.94□□□□□ -1.3
VPS26A-206ENST00000489794 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.94□□□□□ -1.3
VPS26A-206ENST00000489794 RHOUQ7L0Q8 258 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 Q8NA96 180 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 ZNF483Q8TF39 744 aaPredicted RBP6.94□□□□□ -1.3
VPS26A-206ENST00000489794 NRDE2Q9H7Z3 1164 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 A1CFQ9NQ94 594 aaKnown RBP6.94□□□□□ -1.3
VPS26A-206ENST00000489794 ZSCAN32Q9NX65 697 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 XPR1Q9UBH6 696 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 DKK2Q9UBU2 259 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 HESX1Q9UBX0 185 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 AGAP1Q9UPQ3 857 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 SHOC2Q9UQ13 582 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 SNX13Q9Y5W8 968 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 RAD54BQ9Y620 910 aa6.94□□□□□ -1.3
VPS26A-206ENST00000489794 TRIM43BA6NCK2 446 aa6.93□□□□□ -1.3
VPS26A-206ENST00000489794 MBD3L4A6NDZ8 208 aaPredicted RBP6.93□□□□□ -1.3
VPS26A-206ENST00000489794 MBD3L3A6NE82 208 aaPredicted RBP6.93□□□□□ -1.3
VPS26A-206ENST00000489794 APAF1O14727 1248 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms