RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 ROR1Q01973 937 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 KRT31Q15323 416 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 SYCP1Q15431 976 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 PABPC1LQ4VXU2 614 aaKnown RBP12.7□□□□□ -0.38
GGPS1-207ENST00000489692 ZBTB41Q5SVQ8 909 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 ASTLQ6HA08 431 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-207ENST00000489692 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 ELMOD1Q8N336 334 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 SLC44A3Q8N4M1 653 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 ING5Q8WYH8 240 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 POMGNT1Q8WZA1 660 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 DDX12PQ92771 950 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 ATOH1Q92858 354 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-207ENST00000489692 NXPE3Q969Y0 559 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 PPP1R13BQ96KQ4 1090 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
GGPS1-207ENST00000489692 HAPLN2Q9GZV7 340 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 FBXL5Q9UKA1 691 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 CDH7Q9ULB5 785 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 CA14Q9ULX7 337 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 MRPS23Q9Y3D9 190 aaKnown RBP12.7□□□□□ -0.38
GGPS1-207ENST00000489692 TIMM13Q9Y5L4 95 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-207ENST00000489692 TTC26A0AVF1 554 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 KCNJ18B7U540 433 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 AKR1B15C9JRZ8 316 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 CTIFO43310 598 aaKnown RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 GCNT3O95395 438 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 CCNE1P24864 410 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 ACOT2P49753 483 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 ASIC1P78348 528 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 KCNJ12Q14500 433 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 TMEM132DQ14C87 1099 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 ENOX2Q16206 610 aaKnown RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 TCP11X2Q5H9J9 407 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 JADE1Q6IE81 842 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 SLFN12LQ6IEE8 588 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 SLC8B1Q6J4K2 584 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 UNC13DQ70J99 1090 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 MTERF4Q7Z6M4 381 aaKnown RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 MAP4K3Q8IVH8 894 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 FAM114A1Q8IWE2 563 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 ZNF461Q8TAF7 563 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 ITFG1Q8TB96 612 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 SUSD3Q96L08 255 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 BAG1Q99933 345 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 DNMT3BQ9UBC3 853 aaKnown RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 ZFP37Q9Y6Q3 630 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-207ENST00000489692 NUMBLQ9Y6R0 609 aa12.69□□□□□ -0.38
GGPS1-207ENST00000489692 A0A0B4J269 797 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 A0A1W2PQC6 194 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 WDR27A2RRH5 827 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 TISP43B9A030 160 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 ANKRD63C9JTQ0 380 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 H0Y858 1186 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 PIGRP01833 764 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 RHOP08100 348 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 TPM1P09493 284 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 SRFP11831 508 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 GAP43P17677 238 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-207ENST00000489692 GTF2BQ00403 316 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 YWHAHQ04917 246 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-207ENST00000489692 ADCY1Q08828 1119 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 PSMD2Q13200 908 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 HSP90AA4PQ58FG1 418 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 TTI2Q6NXR4 508 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 MTSS1LQ765P7 747 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 CNGA4Q8IV77 575 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 CD302Q8IX05 232 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 KIF18AQ8NI77 898 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 FGF13Q92913 245 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 MCRS1Q96EZ8 462 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 ACCSQ96QU6 501 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 CORO1BQ9BR76 489 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 IRF2BPLQ9H1B7 796 aa12.68□□□□□ -0.38
GGPS1-207ENST00000489692 AGO2Q9UKV8 859 aaKnown RBP12.68□□□□□ -0.38
GGPS1-207ENST00000489692 MYMKA6NI61 221 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 TEX33O43247 280 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 MFAP3LO75121 409 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 NFICP08651 508 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 ATF2P15336 505 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 PTPN2P17706 415 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 CYP3A5P20815 502 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 LRPAP1P30533 357 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 TCF15Q12870 199 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 HTR4Q13639 388 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 CYP4A22Q5TCH4 519 aa12.67□□□□□ -0.38
GGPS1-207ENST00000489692 TPGS2Q68CL5 300 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms