RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ASTE1Q2TB18 679 aaPredicted RBP17.1■□□□□ 0.33
CLDN11-208ENST00000488989 C9orf50Q5SZB4 431 aa17.1■□□□□ 0.33
CLDN11-208ENST00000488989 ADGRF2Q8IZF7 708 aa17.1■□□□□ 0.33
CLDN11-208ENST00000488989 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
CLDN11-208ENST00000488989 EPS8L1Q8TE68 723 aa17.1■□□□□ 0.33
CLDN11-208ENST00000488989 DSEQ9UL01 958 aa17.1■□□□□ 0.33
CLDN11-208ENST00000488989 PCDHB8Q9UN66 801 aa17.1■□□□□ 0.33
CLDN11-208ENST00000488989 NME7Q9Y5B8 376 aa17.1■□□□□ 0.33
CLDN11-208ENST00000488989 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
CLDN11-208ENST00000488989 SYN3O14994 580 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 TRAPPC3O43617 180 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 NRDCO43847 1150 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 TADA2AO75478 443 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 SKILP12757 684 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 CYP11B1P15538 503 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 USP8P40818 1118 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
CLDN11-208ENST00000488989 NDST1P52848 882 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 RAD23BP54727 409 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 ARID5AQ03989 594 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 PTK2Q05397 1052 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 WSCD1Q658N2 575 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 OSTM1Q86WC4 334 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 RNF168Q8IYW5 571 aaPredicted RBP17.09■□□□□ 0.33
CLDN11-208ENST00000488989 SLC4A11Q8NBS3 891 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 DDX1Q92499 740 aaKnown RBP17.09■□□□□ 0.33
CLDN11-208ENST00000488989 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
CLDN11-208ENST00000488989 TWNKQ96RR1 684 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 ELOVL4Q9GZR5 314 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 HAUS4Q9H6D7 363 aa17.09■□□□□ 0.33
CLDN11-208ENST00000488989 NOCTQ9UK39 431 aaKnown RBP17.09■□□□□ 0.33
CLDN11-208ENST00000488989 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 ARHGAP6O43182 974 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 GNL1P36915 607 aaPredicted RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 LHX1P48742 406 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 SHHQ15465 462 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 FUT10Q6P4F1 479 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 ZNF571Q7Z3V5 609 aaPredicted RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 SLC47A2Q86VL8 602 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 TMEM173Q86WV6 379 aaPredicted RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 CRYBG2Q8N1P7 616 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 SLC39A11Q8N1S5 342 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 FIBCD1Q8N539 461 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 IGSF21Q96ID5 467 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 ZNF830Q96NB3 372 aaPredicted RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 ZNF558Q96NG5 402 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
CLDN11-208ENST00000488989 HMGXB4Q9UGU5 601 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 KIAA1257Q9ULG3 409 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 PTPRDP23468 1912 aa17.08■□□□□ 0.32
CLDN11-208ENST00000488989 NT5C1B-RDH14C9J2C7 533 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 I3L4J1 428 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 FGFR3P22607 806 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 GNA15P30679 374 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 EIF4A3P38919 411 aaKnown RBP17.07■□□□□ 0.32
CLDN11-208ENST00000488989 PDE6CP51160 858 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
CLDN11-208ENST00000488989 RAD9BQ6WBX8 426 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 GPIHBP1Q8IV16 184 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 OR6B3Q8NGW1 331 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
CLDN11-208ENST00000488989 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
CLDN11-208ENST00000488989 GPR62Q9BZJ7 368 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 SNX25Q9H3E2 840 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 ACP6Q9NPH0 428 aa17.07■□□□□ 0.32
CLDN11-208ENST00000488989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLDN11-208ENST00000488989 MYH10P35580 1976 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 PLXNA4Q9HCM2 1894 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 SOWAHDA6NJG2 315 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 A8MXQ7 604 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 TLL1O43897 1013 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 OAZ2O95190 189 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 LCA5LO95447 670 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 VDRP11473 427 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 CHRNB2P17787 502 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 LMO2P25791 158 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 BMP8BP34820 402 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 PBX3P40426 434 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 CDR2Q01850 454 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 MRPL58Q14197 206 aaKnown RBP17.06■□□□□ 0.32
CLDN11-208ENST00000488989 BMS1Q14692 1282 aaKnown RBP17.06■□□□□ 0.32
CLDN11-208ENST00000488989 ZNF394Q53GI3 561 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 SPOUT1Q5T280 376 aaKnown RBP17.06■□□□□ 0.32
CLDN11-208ENST00000488989 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
CLDN11-208ENST00000488989 METTL23Q86XA0 190 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 SLC30A5Q8TAD4 765 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 ZNF606Q8WXB4 792 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms