RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 SMARCB1Q12824 385 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 CCDC85BQ15834 202 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-224ENST00000488927 VWA3BQ502W6 1294 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 HSP90AA4PQ58FG1 418 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 TMEM184AQ6ZMB5 413 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
HDAC7-224ENST00000488927 TTC39CQ8N584 583 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 HDAC7Q8WUI4 952 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 CASP10Q92851 521 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 PABPC5Q96DU9 382 aaKnown RBP17.1■□□□□ 0.33
HDAC7-224ENST00000488927 ACBD6Q9BR61 282 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 DNAI2Q9GZS0 605 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 CYP3A43Q9HB55 503 aa17.1■□□□□ 0.33
HDAC7-224ENST00000488927 PRRC2BQ5JSZ5 2229 aaKnown RBP17.1■□□□□ 0.33
HDAC7-224ENST00000488927 GABRDO14764 452 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 ZNF18P17022 549 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
HDAC7-224ENST00000488927 TSPY1Q01534 308 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 ADAM15Q13444 863 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
HDAC7-224ENST00000488927 CTC1Q2NKJ3 1217 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 TPGS2Q68CL5 300 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 RTL10Q7L3V2 364 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 DCP1BQ8IZD4 617 aaKnown RBP17.09■□□□□ 0.33
HDAC7-224ENST00000488927 ZNF461Q8TAF7 563 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 FAM200AQ8TCP9 573 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 SLC22A17Q8WUG5 538 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 PPM1EQ8WY54 764 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 SEMA4DQ92854 862 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 PI4K2AQ9BTU6 479 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 SNX25Q9H3E2 840 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 NDST4Q9H3R1 872 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 TSPY26PQ9H489 355 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 DZANK1Q9NVP4 752 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 DDX43Q9NXZ2 648 aaKnown RBP17.09■□□□□ 0.33
HDAC7-224ENST00000488927 COG5Q9UP83 839 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 HCFC2Q9Y5Z7 792 aa17.09■□□□□ 0.33
HDAC7-224ENST00000488927 VWA8A3KMH1 1905 aa17.08■□□□□ 0.33
HDAC7-224ENST00000488927 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 TGM5O43548 720 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 CPB1P15086 417 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 TBXAS1P24557 533 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-224ENST00000488927 GNL1P36915 607 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-224ENST00000488927 ASPAP45381 313 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 ZNF445P59923 1031 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 ROR1Q01973 937 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 KCNC3Q14003 757 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 IQCB1Q15051 598 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 PALB2Q86YC2 1186 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 KBTBD7Q8WVZ9 684 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 FAM81BQ96LP2 452 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 NT5C1BQ96P26 610 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 ANP32EQ9BTT0 268 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 BCO2Q9BYV7 579 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 CBX8Q9HC52 389 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 CLDND1Q9NY35 253 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
HDAC7-224ENST00000488927 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
HDAC7-224ENST00000488927 LRRC10BA6NIK2 292 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 ABLIM3O94929 683 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 HOXB8P17481 243 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 GTF2F1P35269 517 aaKnown RBP eCLIP17.07■□□□□ 0.322e-7■■■■■ 30
HDAC7-224ENST00000488927 ARPP19P56211 112 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 GPR17Q13304 367 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 KRT31Q15323 416 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 MIIPQ5JXC2 388 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 SPOPLQ6IQ16 392 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 RSPO2Q6UXX9 243 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 UNC93AQ86WB7 457 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 OR6B3Q8NGW1 331 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 C2orf15Q8WU43 125 aaKnown RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 HLA-CQ95604 372 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 RTP3Q9BQQ7 232 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 ZCWPW1Q9H0M4 648 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 APOBEC3GQ9HC16 384 aaKnown RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 GCNT4Q9P109 453 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 AFF4Q9UHB7 1163 aaKnown RBP17.07■□□□□ 0.32
HDAC7-224ENST00000488927 CDH9Q9ULB4 789 aa17.07■□□□□ 0.32
HDAC7-224ENST00000488927 WDR27A2RRH5 827 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 ADAM12O43184 909 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 ATF2P15336 505 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 ELF1P32519 619 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 NFE2Q16621 373 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-224ENST00000488927 EXOC3L4Q17RC7 722 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 UVSSAQ2YD98 709 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
HDAC7-224ENST00000488927 FKBP15Q5T1M5 1219 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 LIN9Q5TKA1 542 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 LLGL2Q6P1M3 1020 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms