RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 C11orf84Q9BUA3 381 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-209ENST00000488860 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 PLVAPQ9BX97 442 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 CYP3A43Q9HB55 503 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 DDX43Q9NXZ2 648 aaKnown RBP13.17□□□□□ -0.3
TRAIP-209ENST00000488860 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 A8MXQ7 604 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 SYN3O14994 580 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 HCRTO43612 131 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 GYPCP04921 128 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 CYP11A1P05108 521 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 TYMPP19971 482 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 FGFR3P22607 806 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 ACAT1P24752 427 aaKnown RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 NDST1P52848 882 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 PLCB3Q01970 1234 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 GOLGA8FQ08AF8 430 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 GOLGA8DPQ0D2H9 430 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 GPM6BQ13491 265 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 DRAP1Q14919 205 aaPredicted RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 RTP2Q5QGT7 225 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 TMEM270Q6UE05 265 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 PRSS55Q6UWB4 352 aaPredicted RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 RIN2Q8WYP3 895 aaPredicted RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 FAXDC2Q96IV6 333 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 PUF60Q9UHX1 559 aaKnown RBP13.16□□□□□ -0.3
TRAIP-209ENST00000488860 DAAM1Q9Y4D1 1078 aa13.16□□□□□ -0.3
TRAIP-209ENST00000488860 F8VZ95 297 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 TACC1O75410 805 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 RB1P06400 928 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 PDGFRBP09619 1106 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 CASP14P31944 242 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 GNL1P36915 607 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-209ENST00000488860 LHX1P48742 406 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 PSMC1P62191 440 aaKnown RBP13.15□□□□□ -0.3
TRAIP-209ENST00000488860 PSMD5Q16401 504 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 FIGNQ5HY92 759 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 ZNF280DQ6N043 979 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 TMC7Q7Z402 723 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-209ENST00000488860 RNF168Q8IYW5 571 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-209ENST00000488860 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-209ENST00000488860 ZNF397Q8NF99 534 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-209ENST00000488860 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 AUTS2Q8WXX7 1259 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 IQCDQ96DY2 449 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 STK33Q9BYT3 514 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 TTYH3Q9C0H2 523 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 ZBP1Q9H171 429 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 DPEP3Q9H4B8 488 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
TRAIP-209ENST00000488860 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-209ENST00000488860 CHD9Q3L8U1 2897 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 TRIOBPQ9H2D6 2365 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-209ENST00000488860 A0A1W2PQJ5 194 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 LRRC53A6NM62 1247 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 H7C4K7 107 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 GRM6O15303 877 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 CILPO75339 1184 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 GFPT2O94808 682 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
TRAIP-209ENST00000488860 STAT1P42224 750 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAIP-209ENST00000488860 CDR1P51861 262 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 ARPP19P56211 112 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 JAM2P57087 298 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 ARID5AQ03989 594 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 ANKS3Q6ZW76 656 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 TTC39CQ8N584 583 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 UBR7Q8N806 425 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 SPPL3Q8TCT6 385 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 SHC3Q92529 594 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 BAP1Q92560 729 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 TMEM209Q96SK2 561 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 TCF25Q9BQ70 676 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 SYT15Q9BQS2 421 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 NT5C1AQ9BXI3 368 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 GPR88Q9GZN0 384 aa13.14□□□□□ -0.31
TRAIP-209ENST00000488860 ELOVL4Q9GZR5 314 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms