RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 C18orf25Q96B23 403 aaPredicted RBP6.45□□□□□ -1.38
COL4A3-206ENST00000487633 SLC22A12Q96S37 553 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 RIT2Q99578 217 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 ARID3AQ99856 593 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 LINC00597Q9H2U6 94 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 PRDM16Q9HAZ2 1276 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 POLD4Q9HCU8 107 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 VAV3Q9UKW4 847 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 HCN2Q9UL51 889 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 SRPK3Q9UPE1 567 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 CSMD1Q96PZ7 3565 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 SPTAN1Q13813 2472 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 DOPEY1Q5JWR5 2465 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 NUMA1Q14980 2115 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CCDC69A6NI79 296 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 DPYSL4O14531 572 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 SLC37A4O43826 429 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 SLC28A2O43868 658 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ADAM23O75077 832 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ATF6P18850 670 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 DRD1P21728 446 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 RDXP35241 583 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ARL2P36404 184 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 SLC6A11P48066 632 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ATXN3P54252 364 aaPredicted RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 PSMC5P62195 406 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CXADRP78310 365 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 SEMG2Q02383 582 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 GFPT1Q06210 699 aaPredicted RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ELAVL2Q12926 359 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CTTNQ14247 550 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CCDC157Q569K6 752 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 B4GALNT3Q6L9W6 998 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 DHRS13Q6UX07 377 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 MAEAQ7L5Y9 396 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 GPR155Q7Z3F1 870 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 GLRX5Q86SX6 157 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ALLCQ8N6M5 410 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 TXNDC5Q8NBS9 432 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 LSM14AQ8ND56 463 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 SLC7A3Q8WY07 619 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CD101Q93033 1021 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 E2F7Q96AV8 911 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CCDC51Q96ER9 411 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ACAP3Q96P50 834 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ZMYND12Q9H0C1 365 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 SLC6A17Q9H1V8 727 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 ECT2Q9H8V3 914 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CPNE5Q9HCH3 593 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 OBP2AQ9NY56 170 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 KIAA1522Q9P206 1035 aaPredicted RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 AFF4Q9UHB7 1163 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
COL4A3-206ENST00000487633 PCDHB9Q9Y5E1 797 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 WNT6Q9Y6F9 365 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 FLNCQ14315 2725 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 CACNA1DQ01668 2161 aa6.44□□□□□ -1.38
COL4A3-206ENST00000487633 SMIM28A0A1B0GU29 152 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 CBX4O00257 560 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 PODXLO00592 558 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 SCAMP3O14828 347 aaKnown RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 MAP3K13O43283 966 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 DTNBO60941 627 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 CPB1P15086 417 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 GSPT1P15170 499 aaKnown RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 YWHABP31946 246 aaKnown RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TIE1P35590 1138 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 ADD1P35611 737 aaKnown RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 GPR15P49685 360 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 ZXDBP98169 803 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 CYP4A11Q02928 519 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TLE3Q04726 772 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 ZNF33AQ06730 810 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 GRIK2Q13002 908 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 PLD1Q13393 1074 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 SART3Q15020 963 aaKnown RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 ZC2HC1CQ53FD0 456 aaPredicted RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 XKR9Q5GH70 373 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TPGS2Q68CL5 300 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TXNDC8Q6A555 127 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 APOA5Q6Q788 366 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 HAUS6Q7Z4H7 955 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 C12orf40Q86WS4 652 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TICAM2Q86XR7 235 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 REXO1Q8N1G1 1221 aaKnown RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 ELMOD1Q8N336 334 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 MAB21L3Q8N8X9 362 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 IL17RCQ8NAC3 791 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 SPRYD3Q8NCJ5 442 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TTC16Q8NEE8 873 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 SPATA18Q8TC71 538 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 GIPC2Q8TF65 315 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 HMGB4Q8WW32 186 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TTC9Q92623 222 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 DDX12PQ92771 950 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 DYDC2Q96IM9 177 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 MTRQ99707 1265 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 GPR88Q9GZN0 384 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 TASP1Q9H6P5 420 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms