RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 TRIM63Q969Q1 353 aa6.91□□□□□ -1.3
CUL3-211ENST00000487558 CPPED1Q9BRF8 314 aaPredicted RBP6.91□□□□□ -1.3
CUL3-211ENST00000487558 TTLL2Q9BWV7 592 aa6.91□□□□□ -1.3
CUL3-211ENST00000487558 FBXO34Q9NWN3 711 aa6.91□□□□□ -1.3
CUL3-211ENST00000487558 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
CUL3-211ENST00000487558 MBD3L4A6NDZ8 208 aaPredicted RBP6.9□□□□□ -1.3
CUL3-211ENST00000487558 MBD3L3A6NE82 208 aaPredicted RBP6.9□□□□□ -1.3
CUL3-211ENST00000487558 ZNF785A8K8V0 405 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 HNRNPDLO14979 420 aaKnown RBP6.9□□□□□ -1.3
CUL3-211ENST00000487558 PLA2G6O60733 806 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 MFAP3LO75121 409 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 AGFG2O95081 481 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 GRPP07492 148 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 MGAT1P26572 445 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 CHKAP35790 457 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 GRK6P43250 576 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 BLMHQ13867 455 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 GRM7Q14831 915 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 PUM3Q15397 648 aaKnown RBP6.9□□□□□ -1.3
CUL3-211ENST00000487558 MPEG1Q2M385 716 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 SLC35G1Q2M3R5 365 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 CCDC38Q502W7 563 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 LIMS2Q7Z4I7 341 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 SLC15A4Q8N697 577 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 SLC16A11Q8NCK7 471 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 OR10H5Q8NGA6 315 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.9□□□□□ -1.3
CUL3-211ENST00000487558 SPON1Q9HCB6 807 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 LUZP4Q9P127 313 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 POGKQ9P215 609 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 ITGB1BP2Q9UKP3 347 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 SLC45A2Q9UMX9 530 aa6.9□□□□□ -1.3
CUL3-211ENST00000487558 AREL1O15033 823 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 DNAJB5O75953 348 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 PAX3P23760 479 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 KLRC1P26715 233 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 SLC11A2P49281 568 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 ZNF135P52742 658 aaPredicted RBP6.89□□□□□ -1.31
CUL3-211ENST00000487558 METTL24Q5JXM2 366 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 DRICH1Q6PGQ1 229 aaPredicted RBP6.89□□□□□ -1.31
CUL3-211ENST00000487558 CATSPERGQ6ZRH7 1159 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 UNC13DQ70J99 1090 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 GPRIN1Q7Z2K8 1008 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 FANCBQ8NB91 859 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 TBC1D15Q8TC07 691 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 LRRC37BQ96QE4 947 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 LSM14BQ9BX40 385 aaKnown RBP6.89□□□□□ -1.31
CUL3-211ENST00000487558 AGO4Q9HCK5 861 aaKnown RBP6.89□□□□□ -1.31
CUL3-211ENST00000487558 HECAQ9UBI9 543 aaPredicted RBP6.89□□□□□ -1.31
CUL3-211ENST00000487558 ST6GALNAC2Q9UJ37 374 aa6.89□□□□□ -1.31
CUL3-211ENST00000487558 ZNF536O15090 1300 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 A0A087WWL8 130 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 CDHR4A6H8M9 788 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 SKAP2O75563 359 aaPredicted RBP6.88□□□□□ -1.31
CUL3-211ENST00000487558 IPO13O94829 963 aaKnown RBP6.88□□□□□ -1.31
CUL3-211ENST00000487558 FSHBP01225 129 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 XRCC6P12956 609 aaKnown RBP eCLIP6.88□□□□□ -1.31
CUL3-211ENST00000487558 CCT5P48643 541 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 CARSP49589 748 aaKnown RBP6.88□□□□□ -1.31
CUL3-211ENST00000487558 EPHB4P54760 987 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 UCP3P55916 312 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 CDSNQ15517 529 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 TUBB8Q3ZCM7 444 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 CRB2Q5IJ48 1285 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 SLFN13Q68D06 897 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 TLDC1Q6P9B6 456 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 GLB1LQ6UWU2 654 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 YAF2Q8IY57 180 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 SLC17A8Q8NDX2 589 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 ST8SIA2Q92186 375 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 EVI5LQ96CN4 794 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 LTV1Q96GA3 475 aaPredicted RBP6.88□□□□□ -1.31
CUL3-211ENST00000487558 TMEM176AQ96HP8 235 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 MPHOSPH9Q99550 1183 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 PLA2G12BQ9BX93 195 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 STK31Q9BXU1 1019 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 STK33Q9BYT3 514 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 IMPG2Q9BZV3 1241 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 TINAGL1Q9GZM7 467 aaPredicted RBP6.88□□□□□ -1.31
CUL3-211ENST00000487558 CHST8Q9H2A9 424 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 PPP4R1LQ9P1A2 415 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 ZNF212Q9UDV6 495 aa6.88□□□□□ -1.31
CUL3-211ENST00000487558 RGS17Q9UGC6 210 aaPredicted RBP6.88□□□□□ -1.31
CUL3-211ENST00000487558 GOLGA6L3A6NEY3 463 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 CLCA1A8K7I4 914 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 M0QYG6 137 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 RASSF9O75901 435 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 TXNP10599 105 aaKnown RBP6.87□□□□□ -1.31
CUL3-211ENST00000487558 PIM1P11309 404 aaPredicted RBP6.87□□□□□ -1.31
CUL3-211ENST00000487558 CYP2C9P11712 490 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 ALDH9A1P49189 494 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 BIRC3Q13489 604 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 FAM160B1Q5W0V3 765 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 MED25Q71SY5 747 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 MYCT1Q8N699 235 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 CCDC150Q8NCX0 1101 aa6.87□□□□□ -1.31
CUL3-211ENST00000487558 ATXN2LQ8WWM7 1075 aaKnown RBP6.87□□□□□ -1.31
CUL3-211ENST00000487558 SPSB4Q96A44 273 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms