RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CD58P19256 250 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 TKTP29401 623 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 HNRNPH3P31942 346 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 CTNNB1P35222 781 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 SOX5P35711 763 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 BMPR1AP36894 532 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 ERVK-21P61565 698 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 YWHAEP62258 255 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 SMAD3P84022 425 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 MRPL58Q14197 206 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 RTP2Q5QGT7 225 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 FAM171A1Q5VUB5 890 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 CACNA2D4Q7Z3S7 1137 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 DDX53Q86TM3 631 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 PPFIBP1Q86W92 1011 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 UNC93AQ86WB7 457 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 CNGA4Q8IV77 575 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 TTC39CQ8N584 583 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 TC2NQ8N9U0 490 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 KLHL23Q8NBE8 558 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 SPC24Q8NBT2 197 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 ANP32BQ92688 251 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 TMEM169Q96HH4 297 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 SAMD11Q96NU1 681 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 SPAG5Q96R06 1193 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 CHST7Q9NS84 486 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 ABHD10Q9NUJ1 306 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 STK39Q9UEW8 545 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 BARX2Q9UMQ3 279 aaPredicted RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 LZTS1Q9Y250 596 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 STXBP5LQ9Y2K9 1186 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 LUC7L2Q9Y383 392 aaKnown RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 TIMM13Q9Y5L4 95 aaPredicted RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 CDH23Q9H251 3354 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 AKR1B15C9JRZ8 316 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 TBC1D4O60343 1298 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 OAZ2O95190 189 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 RB1P06400 928 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 TPM1P09493 284 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 FECHP22830 423 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 DNAJB2P25686 324 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 KRT9P35527 623 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 STAT1P42224 750 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 LHX1P48742 406 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 NDST1P52848 882 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 RAD23BP54727 409 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 DSG1Q02413 1049 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 YWHAHQ04917 246 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 GOLGA8FQ08AF8 430 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 GOLGA8DPQ0D2H9 430 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 CCDC173Q0VFZ6 552 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 MEA1Q16626 185 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 LRIT3Q3SXY7 679 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 VARS2Q5ST30 1063 aaKnown RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 OVOS1Q6IE37 1185 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 TMEM270Q6UE05 265 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 TAS1R1Q7RTX1 841 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 DRC7Q8IY82 874 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 SLC4A11Q8NBS3 891 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 RBBP8NLQ8NC74 664 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 ZNF397Q8NF99 534 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 OR10T2Q8NGX3 314 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 OLIG1Q8TAK6 271 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 EPS8L1Q8TE68 723 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 CPLX3Q8WVH0 158 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 SYN2Q92777 582 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 B3GALT6Q96L58 329 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 TGS1Q96RS0 853 aaKnown RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 PPP1R9BQ96SB3 815 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 PKMYT1Q99640 499 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 TTPALQ9BTX7 342 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 ELOVL4Q9GZR5 314 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 ZBP1Q9H171 429 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 NUCKS1Q9H1E3 243 aaKnown RBP10.22□□□□□ -0.77
MCF2L-227ENST00000486806 NKX2-4Q9H2Z4 354 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 AIPL1Q9NZN9 384 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 MSRAQ9UJ68 235 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 PCDHB4Q9Y5E5 795 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 CEP290O15078 2479 aa10.22□□□□□ -0.77
MCF2L-227ENST00000486806 A8MXQ7 604 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 CYP26A1O43174 497 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 GFPT2O94808 682 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 PAEPP09466 180 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 KRT5P13647 590 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 LMO2P25791 158 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 CLCN1P35523 988 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 PRKCIP41743 596 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 ADKP55263 362 aaKnown RBP10.21□□□□□ -0.77
MCF2L-227ENST00000486806 GSDMDP57764 484 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 UBE3AQ05086 875 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 ORC1Q13415 861 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 USP41Q3LFD5 358 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 PRPF38BQ5VTL8 546 aaKnown RBP10.21□□□□□ -0.77
MCF2L-227ENST00000486806 SFMBT2Q5VUG0 894 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 KIAA0319Q5VV43 1072 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 PPP2R2DQ66LE6 453 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 HGSNATQ68CP4 663 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 ZNF280DQ6N043 979 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 WDR59Q6PJI9 974 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms