RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 GSPT2Q8IYD1 628 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 IQCKQ8N0W5 287 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 EXOC4Q96A65 974 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 CPB2Q96IY4 423 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 ERP44Q9BS26 406 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 PARP2Q9UGN5 583 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 ZSCAN5CA6NGD5 496 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 TNPO2O14787 897 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 TLR3O15455 904 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 TTI1O43156 1089 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 CA12O43570 354 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 XPOTO43592 962 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 SYF2O95926 243 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 ALDH1A1P00352 501 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 VDRP11473 427 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 CD58P19256 250 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 GABRB2P47870 512 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 YARSP54577 528 aaKnown RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 COPS2P61201 443 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 ZNF211Q13398 564 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 DNAJC24Q6P3W2 148 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 LRIG3Q6UXM1 1119 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 ALKAL1Q6UXT8 129 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 CATSPER4Q7RTX7 472 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 POLNQ7Z5Q5 900 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 CDR2LQ86X02 465 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 JAMLQ86YT9 394 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 TFAP2BQ92481 460 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 ZNF668Q96K58 619 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 FEZ2Q9UHY8 353 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.69□□□□□ -0.38
PKP4-213ENST00000486254 TRIP11Q15643 1979 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 ESYT3A0FGR9 886 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 AGPSO00116 658 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 HSF2BPO75031 334 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 CFHP08603 1231 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 KRT19P08727 400 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 SETSIPP0DME0 302 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 CETN2P41208 172 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 PTGIRP43119 386 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 CRYBB1P53674 252 aaPredicted RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 GJA9P57773 515 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 PURAQ00577 322 aaKnown RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 KLF1Q13351 362 aaPredicted RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 ZNF268Q14587 947 aaPredicted RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 ACAP1Q15027 740 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 SNX17Q15036 470 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 CNGA2Q16280 664 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 FSCN1Q16658 493 aaKnown RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 KIZQ2M2Z5 673 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 RPAINQ86UA6 219 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 ERICH1Q86X53 443 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 PASD1Q8IV76 773 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 WDTC1Q8N5D0 677 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 SLC4A11Q8NBS3 891 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 TMEM176AQ96HP8 235 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 RBM41Q96IZ5 413 aaKnown RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 BTBD6Q96KE9 485 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 ERVK-5Q9HDB9 667 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 CHORDC1Q9UHD1 332 aaPredicted RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 UBQLN1Q9UMX0 589 aaKnown RBP12.68□□□□□ -0.38
PKP4-213ENST00000486254 EFR3BQ9Y2G0 817 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 NR2E1Q9Y466 385 aa12.68□□□□□ -0.38
PKP4-213ENST00000486254 C17orf102A2RUQ5 167 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 SIGLEC16A6NMB1 481 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 GOLGA8KD6RF30 607 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 O00370 1275 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 CALCAP01258 141 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 CD4P01730 458 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 FAM163BP0C2L3 166 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 CYBAP13498 195 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 KCNE1P15382 129 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 ATF7P17544 494 aaPredicted RBP12.67□□□□□ -0.38
PKP4-213ENST00000486254 CYP3A5P20815 502 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 CYP2C19P33261 490 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 COILP38432 576 aaPredicted RBP12.67□□□□□ -0.38
PKP4-213ENST00000486254 CFAP58Q5T655 872 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 SCARA3Q6AZY7 606 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 UNC93AQ86WB7 457 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 BEST2Q8NFU1 509 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 GRK7Q8WTQ7 553 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 MAGOHBQ96A72 148 aaKnown RBP12.67□□□□□ -0.38
PKP4-213ENST00000486254 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 DNAI2Q9GZS0 605 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 SDCBP2Q9H190 292 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 SMYD3Q9H7B4 428 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 DDX56Q9NY93 547 aaKnown RBP12.67□□□□□ -0.38
PKP4-213ENST00000486254 POLIQ9UNA4 740 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 AGAP1Q9UPQ3 857 aa12.67□□□□□ -0.38
PKP4-213ENST00000486254 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
PKP4-213ENST00000486254 RNF40O75150 1001 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms