RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ACTN4O43707 911 aaKnown RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 LRG1P02750 347 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 NFICP08651 508 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 ODC1P11926 461 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 WEE1P30291 646 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 AVPR2P30518 371 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 GBP2P32456 591 aaPredicted RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 TUFMP49411 452 aaKnown RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 CLCN5P51795 746 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 ASIC1P78348 528 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 ADCY1Q08828 1119 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 BECN1Q14457 450 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 KNOP1Q1ED39 458 aaKnown RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 DUOXA2Q1HG44 320 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 PABPC1LQ4VXU2 614 aaKnown RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 FOXD4L5Q5VV16 416 aaPredicted RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 OVOS1Q6IE37 1185 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 CENPPQ6IPU0 288 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 ARMCX5Q6P1M9 558 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 RNF19BQ6ZMZ0 732 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 MTSS1LQ765P7 747 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 METTL23Q86XA0 190 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 EFCAB13Q8IY85 973 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 CEP57L1Q8IYX8 460 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 THEM5Q8N1Q8 247 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 TMEM86AQ8N2M4 240 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 SPRYD3Q8NCJ5 442 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 GOLGA5Q8TBA6 731 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 SCFD1Q8WVM8 642 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 FGF13Q92913 245 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 PAGE5Q96GU1 130 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 ZNF512Q96ME7 567 aaPredicted RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 CBWD1Q9BRT8 395 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 IRF2BPLQ9H1B7 796 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 IKZF4Q9H2S9 585 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 TRPV4Q9HBA0 871 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 CYP4F11Q9HBI6 524 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 SLC2A4RGQ9NR83 387 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 RBAKQ9NYW8 714 aaPredicted RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 SERTAD1Q9UHV2 236 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 ITGA11Q9UKX5 1188 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 INSL5Q9Y5Q6 135 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 CACNA1IQ9P0X4 2223 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 PTPRZ1P23471 2315 aaPredicted RBP7.56□□□□□ -1.2
VPS50-218ENST00000485994 A0A1B0GVL5 298 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PDXKO00764 312 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 CYB561D2O14569 222 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PRRG1O14668 218 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 GABRDO14764 452 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PPEF2O14830 753 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 CCL16O15467 120 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
VPS50-218ENST00000485994 VNN2O95498 520 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
VPS50-218ENST00000485994 ASGR2P07307 311 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 RHOP08100 348 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 SRFP11831 508 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 SP100P23497 879 aaPredicted RBP7.55□□□□□ -1.2
VPS50-218ENST00000485994 PLA2G5P39877 138 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 GUCY2FP51841 1108 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 CLDN10P78369 228 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 NUCB2P80303 420 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 RBP5P82980 135 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PLD1Q13393 1074 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 CUL4BQ13620 913 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 HTR4Q13639 388 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 SV2CQ496J9 727 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PRSS36Q5K4E3 855 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 CYP4A22Q5TCH4 519 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 IQCEQ6IPM2 695 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PHLDB3Q6NSJ2 640 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 SUGP1Q8IWZ8 645 aaKnown RBP7.55□□□□□ -1.2
VPS50-218ENST00000485994 ELMOD1Q8N336 334 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 CSGALNACT2Q8N6G5 542 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 XXYLT1Q8NBI6 393 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 GLIS3Q8NEA6 775 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 ZSWIM2Q8NEG5 633 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 SPPL2BQ8TCT7 592 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 ANKRD36BP1Q96IX9 119 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 ZNF560Q96MR9 790 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 RTP3Q9BQQ7 232 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 ACBD6Q9BR61 282 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 LRRC3Q9BY71 257 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 ZCWPW1Q9H0M4 648 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PCIF1Q9H4Z3 704 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 PDE11AQ9HCR9 933 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 AGPAT3Q9NRZ7 376 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 DMAC2Q9NW81 257 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 HSPBP1Q9NZL4 362 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 CEP72Q9P209 647 aa7.55□□□□□ -1.2
VPS50-218ENST00000485994 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
VPS50-218ENST00000485994 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
VPS50-218ENST00000485994 DENND4CQ5VZ89 1909 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms