RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 SLC27A5Q9Y2P5 690 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 MRPS23Q9Y3D9 190 aaKnown RBP19.82■□□□□ 0.76
COL1A1-206ENST00000485870 SNX9Q9Y5X1 595 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 HUS1O60921 280 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 MYO1EQ12965 1108 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 PNOCQ13519 176 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 TDGQ13569 410 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 SLC5A9Q2M3M2 681 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 CENPPQ6IPU0 288 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 TRAPPC11Q7Z392 1133 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 TTC9BQ8N6N2 239 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 PBXIP1Q96AQ6 731 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 ASIC4Q96FT7 647 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 HPDLQ96IR7 371 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 ZCWPW1Q9H0M4 648 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 CEP72Q9P209 647 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 MAPK8IP1Q9UQF2 711 aa19.81■□□□□ 0.76
COL1A1-206ENST00000485870 PDXKO00764 312 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 PRPF40AO75400 957 aaKnown RBP19.8■□□□□ 0.76
COL1A1-206ENST00000485870 SOAT2O75908 522 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 KIF20AO95235 890 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 NR3C1P04150 777 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 CASP4P49662 377 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 FAM160A1Q05DH4 1040 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 SNW1Q13573 536 aaKnown RBP19.8■□□□□ 0.76
COL1A1-206ENST00000485870 KCNB1Q14721 858 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 IQCEQ6IPM2 695 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 NPAS3Q8IXF0 933 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 MFSD14AQ96MC6 490 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 ZNF512Q96ME7 567 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-206ENST00000485870 DMAC2Q9NW81 257 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 GDAP2Q9NXN4 497 aa19.8■□□□□ 0.76
COL1A1-206ENST00000485870 CIZ1Q9ULV3 898 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-206ENST00000485870 ZFP37Q9Y6Q3 630 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-206ENST00000485870 NARSO43776 548 aaKnown RBP19.79■□□□□ 0.76
COL1A1-206ENST00000485870 CALUO43852 315 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-206ENST00000485870 CEBPBP17676 345 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 PLD1Q13393 1074 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 HTR4Q13639 388 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 PDZD4Q76G19 769 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-206ENST00000485870 LRRTM3Q86VH5 581 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 SLC9A9Q8IVB4 645 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 HS6ST3Q8IZP7 471 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 ENGASEQ8NFI3 743 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 PLEKHO2Q8TD55 490 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 TCEAL4Q96EI5 215 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 SEPT5Q99719 369 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-206ENST00000485870 GZF1Q9H116 711 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-206ENST00000485870 AVENQ9NQS1 362 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-206ENST00000485870 DUSP12Q9UNI6 340 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 HCN4Q9Y3Q4 1203 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 NUMBLQ9Y6R0 609 aa19.79■□□□□ 0.76
COL1A1-206ENST00000485870 ANHXE9PGG2 379 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 MYL4P12829 197 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 ACAT1P24752 427 aaKnown RBP19.78■□□□□ 0.76
COL1A1-206ENST00000485870 CCR2P41597 374 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 ALDH1A3P47895 512 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 EPHB3P54753 998 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 TSPY1Q01534 308 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 PRSS36Q5K4E3 855 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 CYP4A22Q5TCH4 519 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 CEP135Q66GS9 1140 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 PARM1Q6UWI2 310 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 BMP8AQ7Z5Y6 402 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 OSTM1Q86WC4 334 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 DCP1BQ8IZD4 617 aaKnown RBP19.78■□□□□ 0.76
COL1A1-206ENST00000485870 ADGRF2Q8IZF7 708 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 TMEM86AQ8N2M4 240 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 SLC44A3Q8N4M1 653 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 TOP6BLQ8N6T0 577 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 ZNF516Q92618 1163 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 NXPE3Q969Y0 559 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 MCRS1Q96EZ8 462 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 DNAJC25Q9H1X3 360 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 ASAH2Q9NR71 780 aa19.78■□□□□ 0.76
COL1A1-206ENST00000485870 DDX43Q9NXZ2 648 aaKnown RBP19.78■□□□□ 0.76
COL1A1-206ENST00000485870 ABI2Q9NYB9 513 aaPredicted RBP19.78■□□□□ 0.76
COL1A1-206ENST00000485870 ZNF318Q5VUA4 2279 aa19.77■□□□□ 0.76
COL1A1-206ENST00000485870 CST3P01034 146 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-206ENST00000485870 PDGFBP01127 241 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-206ENST00000485870 MYL7Q01449 175 aa19.77■□□□□ 0.76
COL1A1-206ENST00000485870 SOWAHAQ2M3V2 549 aa19.77■□□□□ 0.76
COL1A1-206ENST00000485870 MGAT5BQ3V5L5 792 aa19.77■□□□□ 0.76
COL1A1-206ENST00000485870 SMYD4Q8IYR2 804 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-206ENST00000485870 GUF1Q8N442 669 aaKnown RBP19.77■□□□□ 0.76
COL1A1-206ENST00000485870 ERCC4Q92889 916 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-206ENST00000485870 FGF14Q92915 247 aa19.77■□□□□ 0.76
COL1A1-206ENST00000485870 TMLHEQ9NVH6 421 aa19.77■□□□□ 0.76
COL1A1-206ENST00000485870 TRAF3IP3Q9Y228 551 aa19.77■□□□□ 0.76
COL1A1-206ENST00000485870 LRRIQ3A6PVS8 624 aaPredicted RBP19.76■□□□□ 0.75
COL1A1-206ENST00000485870 NRG2O14511 850 aaPredicted RBP19.76■□□□□ 0.75
COL1A1-206ENST00000485870 ZNF197O14709 1029 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 HCRTO43612 131 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 PHACTR2O75167 634 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 BIRC3Q13489 604 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 TRPC3Q13507 836 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 MTSS1LQ765P7 747 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 SUGP1Q8IWZ8 645 aaKnown RBP19.76■□□□□ 0.75
COL1A1-206ENST00000485870 FBXL6Q8N531 539 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 SPPL2BQ8TCT7 592 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms