RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	TOP6BL	Q8N6T0	577 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	MRPL43	Q8N983	215 aa	Known RBP	13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	CCDC150	Q8NCX0	1101 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	OR10T2	Q8NGX3	314 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	PIK3R5	Q8WYR1	880 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	TAF4B	Q92750	862 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	MRPL38	Q96DV4	380 aa	Known RBP	13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	KREMEN1	Q96MU8	473 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	KLHL5	Q96PQ7	755 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	CLSTN3	Q9BQT9	956 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	IMPG2	Q9BZV3	1241 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	RXFP1	Q9HBX9	757 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	RTN4	Q9NQC3	1192 aa	Known RBP	13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	MTMR10	Q9NXD2	777 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	HMGXB4	Q9UGU5	601 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796	ATG2A	Q2TAZ0	1938 aa		13.6	□□□□□ -0.23
HDAC7-223	ENST00000485796		A0A1B0GTH6	734 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	GTPBP10	A4D1E9	387 aa	Known RBP	13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	CARNS1	A5YM72	827 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	GOLGA6L3	A6NEY3	463 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	EPHB6	O15197	1021 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	TEX28	O15482	410 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	CBFA2T2	O43439	604 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	HUS1	O60921	280 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	OAZ2	O95190	189 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	CALCA	P01258	141 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	UROD	P06132	367 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	PDGFRB	P09619	1106 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	TNNC1	P63316	161 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	SMC1A	Q14683	1233 aa	Known RBP	13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	NR1I3	Q14994	352 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	PSMD5	Q16401	504 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	EXOC3L4	Q17RC7	722 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	OVOS1	Q6IE37	1185 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	KIAA1841	Q6NSI8	718 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	GPR153	Q6NV75	609 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	TRIM65	Q6PJ69	517 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	LRRTM3	Q86VH5	581 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	ADGRF2	Q8IZF7	708 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	APPL2	Q8NEU8	664 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	WHAMM	Q8TF30	809 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	TWNK	Q96RR1	684 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	LSM14B	Q9BX40	385 aa	Known RBP	13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	BCO2	Q9BYV7	579 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	TRIM5	Q9C035	493 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	XPO4	Q9C0E2	1151 aa	Known RBP	13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	NIF3L1	Q9GZT8	377 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	LMAN2L	Q9H0V9	348 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	DPEP3	Q9H4B8	488 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	MRPL17	Q9NRX2	175 aa	Known RBP	13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	MTRR	Q9UBK8	725 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	FBXL5	Q9UKA1	691 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	SIK3	Q9Y2K2	1263 aa		13.59	□□□□□ -0.23
HDAC7-223	ENST00000485796	GABRD	O14764	452 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	CLASP2	O75122	1294 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	ATP2C2	O75185	946 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	NOL4	O94818	638 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	VNN2	O95498	520 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	CD58	P19256	250 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	ACO1	P21399	889 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	WARS	P23381	471 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	ARPP19	P56211	112 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	YWHAH	Q04917	246 aa	Predicted RBP	13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	CUL2	Q13617	745 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	SYCP1	Q15431	976 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	CTXN3	Q4LDR2	81 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	TCEAL5	Q5H9L2	206 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	MICALL1	Q8N3F8	863 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	UBR7	Q8N806	425 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	VN1R2	Q8NFZ6	395 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	FEZF2	Q8TBJ5	459 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	NT5C1B	Q96P26	610 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	ELOVL4	Q9GZR5	314 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	NGRN	Q9NPE2	291 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	TMLHE	Q9NVH6	421 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	DDX43	Q9NXZ2	648 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	CDY1	Q9Y6F8	540 aa		13.58	□□□□□ -0.24
HDAC7-223	ENST00000485796	TSC2	P49815	1807 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	MYBPHL	A2RUH7	354 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	TACC1	O75410	805 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	TPM3	P06753	285 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	SPATA31D3	P0C874	917 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	POU3F3	P20264	500 aa	Predicted RBP	13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	PAX3	P23760	479 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	OR1D2	P34982	312 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	GNL1	P36915	607 aa	Predicted RBP	13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	NRIP1	P48552	1158 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	PSMC1	P62191	440 aa	Known RBP	13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	PTPRO	Q16827	1216 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	KLHDC7A	Q5VTJ3	777 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	IQCE	Q6IPM2	695 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	SPATA31D4	Q6ZUB0	917 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	ANKS3	Q6ZW76	656 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	METTL23	Q86XA0	190 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	PALB2	Q86YC2	1186 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	PPM1K	Q8N3J5	372 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	OR6B3	Q8NGW1	331 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	PKMYT1	Q99640	499 aa		13.57	□□□□□ -0.24
HDAC7-223	ENST00000485796	IGFLR1	Q9H665	355 aa		13.57	□□□□□ -0.24

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