RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 STK39Q9UEW8 545 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 BARX2Q9UMQ3 279 aaPredicted RBP16.94■□□□□ 0.3
APOE-205ENST00000485628 COLQQ9Y215 455 aaPredicted RBP16.94■□□□□ 0.3
APOE-205ENST00000485628 STXBP5LQ9Y2K9 1186 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 ARHGEF37A1IGU5 675 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 F8VZ95 297 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 TRIM21P19474 475 aaKnown RBP16.93■□□□□ 0.3
APOE-205ENST00000485628 TKTP29401 623 aaKnown RBP16.93■□□□□ 0.3
APOE-205ENST00000485628 RAP1GAPP47736 663 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 ZBED6P86452 979 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 DSG1Q02413 1049 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 CAMK1Q14012 370 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 RTP2Q5QGT7 225 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 SPOUT1Q5T280 376 aaKnown RBP16.93■□□□□ 0.3
APOE-205ENST00000485628 DSTYKQ6XUX3 929 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 UNC93AQ86WB7 457 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 CRYBG2Q8N1P7 616 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 TTC39CQ8N584 583 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 SYN2Q92777 582 aaPredicted RBP16.93■□□□□ 0.3
APOE-205ENST00000485628 MMS19Q96T76 1030 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 DNAJC7Q99615 494 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 PKMYT1Q99640 499 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 NKX2-4Q9H2Z4 354 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 IMPACTQ9P2X3 320 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 DSEQ9UL01 958 aa16.93■□□□□ 0.3
APOE-205ENST00000485628 TRIOBPQ9H2D6 2365 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 ODC1P11926 461 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 FECHP22830 423 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 DNAJB2P25686 324 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 LMO2P25791 158 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 CASP14P31944 242 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 CLCN1P35523 988 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 LHX1P48742 406 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 RAD23BP54727 409 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 UBE3AQ05086 875 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 PRPF38BQ5VTL8 546 aaKnown RBP16.92■□□□□ 0.3
APOE-205ENST00000485628 FAM171A1Q5VUB5 890 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 E4F1Q66K89 784 aaPredicted RBP16.92■□□□□ 0.3
APOE-205ENST00000485628 PDXDC1Q6P996 788 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 TMC6Q7Z403 805 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 IRF2BP2Q7Z5L9 587 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 ADGRF2Q8IZF7 708 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 TC2NQ8N9U0 490 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 LNX1Q8TBB1 728 aaPredicted RBP16.92■□□□□ 0.3
APOE-205ENST00000485628 PIK3R5Q8WYR1 880 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 TMEM169Q96HH4 297 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 TWNKQ96RR1 684 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 ELOVL4Q9GZR5 314 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 ZBP1Q9H171 429 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 NLRC4Q9NPP4 1024 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 HMGXB4Q9UGU5 601 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 MSRAQ9UJ68 235 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 TIMM13Q9Y5L4 95 aaPredicted RBP16.92■□□□□ 0.3
APOE-205ENST00000485628 IRAK3Q9Y616 596 aa16.92■□□□□ 0.3
APOE-205ENST00000485628 H3BNC9 293 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 FSCN2O14926 492 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 DNAJB1P25685 340 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 SOX5P35711 763 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 NDST1P52848 882 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 USP41Q3LFD5 358 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 VARS2Q5ST30 1063 aaKnown RBP16.91■□□□□ 0.3
APOE-205ENST00000485628 FAM171BQ6P995 826 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 SCARA5Q6ZMJ2 495 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 SLC4A11Q8NBS3 891 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 OLIG1Q8TAK6 271 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 PCMTD1Q96MG8 357 aaPredicted RBP16.91■□□□□ 0.3
APOE-205ENST00000485628 ACBD6Q9BR61 282 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 SYT11Q9BT88 431 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 TTPALQ9BTX7 342 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 BACE2Q9Y5Z0 518 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 TRANK1O15050 2925 aa16.91■□□□□ 0.3
APOE-205ENST00000485628 ATG2AQ2TAZ0 1938 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 LRRC53A6NM62 1247 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 HCRTO43612 131 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 MFAP3LO75121 409 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 CTSAP10619 480 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 CTNNB1P35222 781 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 GNL1P36915 607 aaPredicted RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 PRKCIP41743 596 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 YWHAEP62258 255 aaKnown RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 KRT17Q04695 432 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 YWHAHQ04917 246 aaPredicted RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 MEA1Q16626 185 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 ARHGAP44Q17R89 818 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 OVOS1Q6IE37 1185 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 RSPO2Q6UXX9 243 aaPredicted RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 VPS52Q8N1B4 723 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 OR10T2Q8NGX3 314 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 ZSWIM1Q9BR11 485 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 C11orf84Q9BUA3 381 aaPredicted RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 OXCT2Q9BYC2 517 aaPredicted RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 NUCKS1Q9H1E3 243 aaKnown RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 RXFP1Q9HBX9 757 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 MTRRQ9UBK8 725 aa16.9■□□□□ 0.3
APOE-205ENST00000485628 LUC7L2Q9Y383 392 aaKnown RBP16.9■□□□□ 0.3
APOE-205ENST00000485628 PAEPP09466 180 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 PNMA6AP0CW24 399 aaPredicted RBP16.89■□□□□ 0.29
APOE-205ENST00000485628 KRT9P35527 623 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 STAT1P42224 750 aa16.89■□□□□ 0.29
APOE-205ENST00000485628 RAPGEF1Q13905 1077 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms