RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	FAM173B	Q6P4H8	233 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	DSTYK	Q6XUX3	929 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	RNF19B	Q6ZMZ0	732 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	USP49	Q70CQ1	688 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	BRAP	Q7Z569	592 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	TCEAL8	Q8IYN2	117 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	FAM160A2	Q8N612	972 aa	Predicted RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	APPL2	Q8NEU8	664 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	EPSTI1	Q96J88	318 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	TRMT61B	Q9BVS5	477 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	RPF1	Q9H9Y2	349 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	PLEKHA5	Q9HAU0	1116 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	PARVG	Q9HBI0	331 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZFP14	Q9HCL3	533 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	RXFP3	Q9NSD7	469 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	RBM12	Q9NTZ6	932 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	GDE1	Q9NZC3	331 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	UBQLN1	Q9UMX0	589 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	CLIC4	Q9Y696	253 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	PIAS3	Q9Y6X2	628 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	ARHGEF37	A1IGU5	675 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	C1QTNF9B	B2RNN3	333 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	TISP43	B9A030	160 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	ANKRD63	C9JTQ0	380 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	PPEF2	O14830	753 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	AXIN1	O15169	862 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	OGT	O15294	1046 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	TBCA	O75347	108 aa	Known RBP	11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	PROS1	P07225	676 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	C1QTNF9	P0C862	333 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	CHRNB1	P11230	501 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	GJA1	P17302	382 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	CCNE1	P24864	410 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	GDI1	P31150	447 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	CCR2	P41597	374 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	SHC2	P98077	582 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	CEBPZ	Q03701	1054 aa	Known RBP	11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	YWHAH	Q04917	246 aa	Predicted RBP	11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	TWF1	Q12792	350 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZBTB6	Q15916	424 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	FAM78A	Q5JUQ0	283 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	TPGS2	Q68CL5	300 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	SLC39A4	Q6P5W5	647 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	VIT	Q6UXI7	678 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	CEP68	Q76N32	757 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	RTL10	Q7L3V2	364 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	DYM	Q7RTS9	669 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	USP37	Q86T82	979 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	LARP4B	Q92615	738 aa	Known RBP	11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	IRF7	Q92985	503 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	PGLYRP2	Q96PD5	576 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	IER2	Q9BTL4	223 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	MSTO1	Q9BUK6	570 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	ARRDC1-AS1	Q9H2J1	176 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	IKZF4	Q9H2S9	585 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	RTN4	Q9NQC3	1192 aa	Known RBP	11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	C2orf42	Q9NWW7	574 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	CEP72	Q9P209	647 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZMIZ1	Q9ULJ6	1067 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	INSL5	Q9Y5Q6	135 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	THADA	Q6YHU6	1953 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	ABCA7	Q8IZY2	2146 aa		11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.48	□□□□□ -0.57
HMGN1-215	ENST00000485550		K7ESF4	209 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	SLC26A4	O43511	780 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	FAM189A1	O60320	539 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	BMP15	O95972	392 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	MYL4	P12829	197 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	LRPAP1	P30533	357 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	DDIT3	P35638	169 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ACOT2	P49753	483 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZNF131	P52739	623 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	PRSS36	Q5K4E3	855 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	CYP4A22	Q5TCH4	519 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	JADE1	Q6IE81	842 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	IQCE	Q6IPM2	695 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	PDZD4	Q76G19	769 aa	Predicted RBP	11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	LONP2	Q86WA8	852 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	MAP4K3	Q8IVH8	894 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ELMOD1	Q8N336	334 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	C12orf50	Q8NA57	414 aa	Predicted RBP	11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZNF512	Q96ME7	567 aa	Predicted RBP	11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZSWIM3	Q96MP5	696 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	CLIC6	Q96NY7	704 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	FIZ1	Q96SL8	496 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	PANK2	Q9BZ23	570 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	AFF4	Q9UHB7	1163 aa	Known RBP	11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	SLC27A5	Q9Y2P5	690 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ASPM	Q8IZT6	3477 aa		11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ASCC3	Q8N3C0	2202 aa	Known RBP	11.47	□□□□□ -0.57
HMGN1-215	ENST00000485550	ANK1	P16157	1881 aa		11.46	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZZEF1	O43149	2961 aa		11.46	□□□□□ -0.57
HMGN1-215	ENST00000485550	NCAN	O14594	1321 aa		11.46	□□□□□ -0.57
HMGN1-215	ENST00000485550		A0A0B4J269	797 aa		11.46	□□□□□ -0.57
HMGN1-215	ENST00000485550		M0QZQ0	153 aa		11.46	□□□□□ -0.57
HMGN1-215	ENST00000485550	TM4SF5	O14894	197 aa		11.46	□□□□□ -0.57
HMGN1-215	ENST00000485550	XPOT	O43592	962 aa	Known RBP	11.46	□□□□□ -0.57
HMGN1-215	ENST00000485550	VNN2	O95498	520 aa		11.46	□□□□□ -0.57

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