RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	EXOC2	Q96KP1	924 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	CAPNS2	Q96L46	248 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	DEFB129	Q9H1M3	183 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	CYP4F11	Q9HBI6	524 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	TMOD2	Q9NZR1	351 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	ZNF70	Q9UC06	446 aa	Predicted RBP	5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	PGAP2	Q9UHJ9	254 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	FAM205A	Q6ZU69	1335 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	SLC12A8	A0AV02	714 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	TRIM24	O15164	1050 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	LPXN	O60711	386 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	SCAF4	O95104	1147 aa	Known RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	IFIT2	P09913	472 aa	Known RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	HSPA1A	P0DMV8	641 aa	Known RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	HSPA1B	P0DMV9	641 aa	Known RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	LAG3	P18627	525 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	HK1	P19367	917 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	PRDX5	P30044	214 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	PTTG1IP	P53801	180 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	FKBP1A	P62942	108 aa	Known RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	PICALM	Q13492	652 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	MTX1	Q13505	466 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	RASA3	Q14644	834 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	SUPT20HL1	Q3ZLR7	823 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	HSP90AB4P	Q58FF6	505 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	RGMB	Q6NW40	437 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	OVCH1	Q7RTY7	1134 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	ERC1	Q8IUD2	1116 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	CMTM4	Q8IZR5	234 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	ZGPAT	Q8N5A5	531 aa	Known RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	SSH3	Q8TE77	659 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	C16orf92	Q96LL3	132 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	WDR92	Q96MX6	357 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	NCDN	Q9UBB6	729 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	FPGT-TNNI3K	V9GXZ4	949 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	DICER1	Q9UPY3	1922 aa	Known RBP	5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	CACNA1F	O60840	1977 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	SPEF2	Q9C093	1822 aa		5.69	□□□□□ -1.5
SFPQ-208	ENST00000485365	CNTNAP1	P78357	1384 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	HIP1R	O75146	1068 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	RECQL4	O94761	1208 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	UQCRFS1P1	P0C7P4	283 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	GNAT2	P19087	354 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	MMP14	P50281	582 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	RRP1	P56182	461 aa	Known RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	IRX6	P78412	446 aa	Predicted RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	SLC6A3	Q01959	620 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	ROM1	Q03395	351 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	TNFAIP1	Q13829	316 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	RASGRF1	Q13972	1273 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	MIGA2	Q7L4E1	593 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	CLASRP	Q8N2M8	674 aa	Known RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	SPATA5	Q8NB90	893 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	SREK1	Q8WXA9	508 aa	Known RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	MYEOV	Q96EZ4	313 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	IPO9	Q96P70	1041 aa	Known RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	DNAJC2	Q99543	621 aa	Known RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	NOL10	Q9BSC4	688 aa	Known RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	TMEM39B	Q9GZU3	492 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	ZBTB40	Q9NUA8	1239 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	HMG20B	Q9P0W2	317 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	MAST3	O60307	1309 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	AOX1	Q06278	1338 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	LTBP1	Q14766	1721 aa		5.68	□□□□□ -1.5
SFPQ-208	ENST00000485365	SCN4A	P35499	1836 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	AHRR	A9YTQ3	701 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	RAB11FIP3	O75154	756 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	IDH1	O75874	414 aa	Known RBP	5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	GYPE	P15421	78 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	TYRP1	P17643	537 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	NPEPPS	P55786	919 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	GSTO1	P78417	241 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	IRF9	Q00978	393 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	KIF23	Q02241	960 aa	Predicted RBP	5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	MAP2K1	Q02750	393 aa	Predicted RBP	5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	MECOM	Q03112	1051 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	ARMC5	Q96C12	935 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	EAF2	Q96CJ1	260 aa	Predicted RBP	5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	KIF1BP	Q96EK5	621 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	DYDC2	Q96IM9	177 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	HAPLN2	Q9GZV7	340 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	BOLA2	Q9H3K6	86 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	SERHL2	Q9H4I8	314 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	KCMF1	Q9P0J7	381 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	SIRPG	Q9P1W8	387 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	DNAI1	Q9UI46	699 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	NOP58	Q9Y2X3	529 aa	Known RBP	5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	MSRB2	Q9Y3D2	182 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	MYH3	P11055	1940 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	LRRC37A	A6NMS7	1700 aa		5.67	□□□□□ -1.5
SFPQ-208	ENST00000485365	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.66	□□□□□ -1.5
SFPQ-208	ENST00000485365	PDPK1	O15530	556 aa		5.66	□□□□□ -1.5
SFPQ-208	ENST00000485365	LDHC	P07864	332 aa		5.66	□□□□□ -1.5
SFPQ-208	ENST00000485365	ZBTB48	P10074	688 aa	Predicted RBP	5.66	□□□□□ -1.5
SFPQ-208	ENST00000485365	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
SFPQ-208	ENST00000485365	MCAM	P43121	646 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms