RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	CYFIP2	Q96F07	1278 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	DYDC2	Q96IM9	177 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	WDR92	Q96MX6	357 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	WAC	Q9BTA9	647 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	C14orf93	Q9H972	538 aa	Known RBP	4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	CHST12	Q9NRB3	414 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	EVL	Q9UI08	416 aa	Predicted RBP	4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	DNAI1	Q9UI46	699 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	INTU	Q9ULD6	942 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	FAM50B	Q9Y247	325 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	STXBP5L	Q9Y2K9	1186 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	IPP	Q9Y573	584 aa		4.8	□□□□□ -1.64
VPS8-223	ENST00000485024	APAF1	O14727	1248 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	DAPK3	O43293	454 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	CREB3	O43889	395 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	BMP15	O95972	392 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	CELA2A	P08217	269 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	ITGAM	P11215	1152 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	HTR1B	P28222	390 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	AGFG1	P52594	562 aa	Known RBP	4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	TOGARAM2	Q6ZUX3	1019 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	OVCH2	Q7RTZ1	564 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	MORC1	Q86VD1	984 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	DRC7	Q8IY82	874 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	KIAA0319L	Q8IZA0	1049 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	SPICE1	Q8N0Z3	855 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	GPR156	Q8NFN8	814 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	PPP1R14C	Q8TAE6	165 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	IL17RA	Q96F46	866 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	SCOC	Q9UIL1	159 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	SERPINB13	Q9UIV8	391 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	PHTF1	Q9UMS5	762 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	L1RE1	Q9UN81	338 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	CFAP43	Q8NDM7	1665 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	LRP5	O75197	1615 aa		4.79	□□□□□ -1.64
VPS8-223	ENST00000485024	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	MARCH11	A6NNE9	402 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	MTSS1	O43312	755 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	PQBP1	O60828	265 aa	Known RBP	4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	FOS	P01100	380 aa	Predicted RBP	4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	CCT2	P78371	535 aa	Known RBP	4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	MGAT5	Q09328	741 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	SCAP	Q12770	1279 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	SEMA5A	Q13591	1074 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	DHX8	Q14562	1220 aa	Known RBP	4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	RAB39A	Q14964	217 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	KRT72	Q14CN4	511 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	POLD3	Q15054	466 aa	Predicted RBP	4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	RNF220	Q5VTB9	566 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	DPP9	Q86TI2	863 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	SYT12	Q8IV01	421 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	KRT78	Q8N1N4	520 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	C3orf20	Q8ND61	904 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	FAM156A	Q8NDB6	213 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	RIN2	Q8WYP3	895 aa	Predicted RBP	4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	RGMA	Q96B86	450 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	FOXJ2	Q9P0K8	574 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	LIMCH1	Q9UPQ0	1083 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	MAP3K2	Q9Y2U5	619 aa		4.78	□□□□□ -1.64
VPS8-223	ENST00000485024	FRS3	O43559	492 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	AKR1B10	O60218	316 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	FTL	P02792	175 aa	Predicted RBP	4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	LTA4H	P09960	611 aa	Known RBP	4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	SETSIP	P0DME0	302 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	KRT10	P13645	584 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	PEX2	P28328	305 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	ECHS1	P30084	290 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	CDC42EP1	Q00587	391 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	GALE	Q14376	348 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	NOMO1	Q15155	1222 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	LLGL1	Q15334	1064 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	GRAMD1B	Q3KR37	738 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	PDCD4	Q53EL6	469 aa	Known RBP	4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	C19orf54	Q5BKX5	351 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	C11orf87	Q6NUJ2	197 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	NPNT	Q6UXI9	565 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	MAEA	Q7L5Y9	396 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	FAM83A	Q86UY5	434 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	UNC5B	Q8IZJ1	945 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	KLHDC4	Q8TBB5	520 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	LRTOMT	Q8WZ04	291 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	DPF1	Q92782	380 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	ZNF48	Q96MX3	618 aa	Predicted RBP	4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	FCRL4	Q96PJ5	515 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	CGRRF1	Q99675	332 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	ARPC5L	Q9BPX5	153 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	B3GNT5	Q9BYG0	378 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	LRRC27	Q9C0I9	530 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	BTBD1	Q9H0C5	482 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	PRDM12	Q9H4Q4	367 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	CNNM1	Q9NRU3	951 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	TDP1	Q9NUW8	608 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	CALCOCO1	Q9P1Z2	691 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	TAGLN3	Q9UI15	199 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024	PTPRK	Q15262	1439 aa		4.77	□□□□□ -1.65
VPS8-223	ENST00000485024		A0A088AWK7	358 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	NTN1	O95631	604 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms