RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ADGRF2Q8IZF7 708 aa20.56■□□□□ 0.88
SNX17-206ENST00000484886 TMEM86AQ8N2M4 240 aa20.56■□□□□ 0.88
SNX17-206ENST00000484886 TMEM174Q8WUU8 243 aa20.56■□□□□ 0.88
SNX17-206ENST00000484886 ZNF516Q92618 1163 aa20.56■□□□□ 0.88
SNX17-206ENST00000484886 MMS19Q96T76 1030 aa20.56■□□□□ 0.88
SNX17-206ENST00000484886 GDAP2Q9NXN4 497 aa20.56■□□□□ 0.88
SNX17-206ENST00000484886 BIN1O00499 593 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 PSMC2P35998 433 aaKnown RBP20.55■□□□□ 0.88
SNX17-206ENST00000484886 TNNC1P63316 161 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 MYL7Q01449 175 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 CAMK4Q16566 473 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 EDRF1Q3B7T1 1238 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 DCP1BQ8IZD4 617 aaKnown RBP20.55■□□□□ 0.88
SNX17-206ENST00000484886 PLCD3Q8N3E9 789 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 TOP6BLQ8N6T0 577 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 TMC2Q8TDI7 906 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 GZF1Q9H116 711 aaPredicted RBP20.55■□□□□ 0.88
SNX17-206ENST00000484886 EPHX3Q9H6B9 360 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 HCFC1R1Q9NWW0 138 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 DDX43Q9NXZ2 648 aaKnown RBP20.55■□□□□ 0.88
SNX17-206ENST00000484886 LIMD1Q9UGP4 676 aa20.55■□□□□ 0.88
SNX17-206ENST00000484886 MTMR11A4FU01 709 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 PSMA7O14818 248 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 CETN3O15182 167 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 AKAP3O75969 853 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 PAPLNO95428 1278 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 CST3P01034 146 aaPredicted RBP20.54■□□□□ 0.88
SNX17-206ENST00000484886 POU2F2P09086 479 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 VAMP7P51809 220 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 MYL6P60660 151 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 DLG4P78352 724 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 TWF1Q12792 350 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 DUSP4Q13115 394 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 PABPC1LQ4VXU2 614 aaKnown RBP20.54■□□□□ 0.88
SNX17-206ENST00000484886 ZCWPW2Q504Y3 356 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 TDRD10Q5VZ19 366 aaKnown RBP20.54■□□□□ 0.88
SNX17-206ENST00000484886 INTS8Q75QN2 995 aaKnown RBP20.54■□□□□ 0.88
SNX17-206ENST00000484886 ATAD1Q8NBU5 361 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 EEF2KMTQ96G04 330 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 GBP4Q96PP9 640 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 RTP3Q9BQQ7 232 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 ZCWPW1Q9H0M4 648 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 SLC27A5Q9Y2P5 690 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 YIPF1Q9Y548 306 aa20.54■□□□□ 0.88
SNX17-206ENST00000484886 PI4K2BG5E9Z4 385 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 MAPK13O15264 365 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 EPB41P11171 864 aaKnown RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 PTPN2P17706 415 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 ACAT1P24752 427 aaKnown RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 ALDH1A3P47895 512 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 PLD1Q13393 1074 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 SOWAHAQ2M3V2 549 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 WDR72Q3MJ13 1102 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 COBLL1Q53SF7 1204 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 IQCEQ6IPM2 695 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 KLHL10Q6JEL2 608 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 ZDHHC14Q8IZN3 488 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 ADSSL1Q8N142 457 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 SYAP1Q96A49 352 aaPredicted RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 ZNF512Q96ME7 567 aaPredicted RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 SEPT5Q99719 369 aaPredicted RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 CORO1BQ9BR76 489 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 MMRN2Q9H8L6 949 aa20.53■□□□□ 0.88
SNX17-206ENST00000484886 ABI2Q9NYB9 513 aaPredicted RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNX17-206ENST00000484886 DNMT3BQ9UBC3 853 aaKnown RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 NXF1Q9UBU9 619 aaKnown RBP20.53■□□□□ 0.88
SNX17-206ENST00000484886 VNN2O95498 520 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 TRIM49P0CI25 452 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 TRIM49CP0CI26 452 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 PPP1R2P41236 205 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 LHX1P48742 406 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 EPHB3P54753 998 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 NCOA4Q13772 614 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 ZNF699Q32M78 642 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 CENPPQ6IPU0 288 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 MYADMQ96S97 322 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 C1QTNF1Q9BXJ1 281 aa20.52■□□□□ 0.88
SNX17-206ENST00000484886 TRIM49BA6NDI0 452 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 N4BP1O75113 896 aaKnown RBP20.51■□□□□ 0.87
SNX17-206ENST00000484886 C4BPAP04003 597 aaKnown RBP20.51■□□□□ 0.87
SNX17-206ENST00000484886 ASGR2P07307 311 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 RHOP08100 348 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 PCSK1P29120 753 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 ATICP31939 592 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 PIK3CAP42336 1068 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 CLDN10P78369 228 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 LRRC63Q05C16 580 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 MORC3Q14149 939 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 MGAT5BQ3V5L5 792 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 ANKRD40Q6AI12 368 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 DPH6Q7L8W6 267 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 OSTM1Q86WC4 334 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 TTC9BQ8N6N2 239 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 SPATA18Q8TC71 538 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 FAM200AQ8TCP9 573 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 ING5Q8WYH8 240 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 DHTKD1Q96HY7 919 aaPredicted RBP20.51■□□□□ 0.87
SNX17-206ENST00000484886 ACBD6Q9BR61 282 aa20.51■□□□□ 0.87
SNX17-206ENST00000484886 SNX25Q9H3E2 840 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms