RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 VPS52Q8N1B4 723 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 TMEM174Q8WUU8 243 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 CYTH2Q99418 400 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 ARL8BQ9NVJ2 186 aa12.2□□□□□ -0.46
SEC61A1-205ENST00000483956 IGLV3-22A0A075B6J6 115 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 PDE5AO76074 875 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 COL6A2P12110 1019 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 EEF2P13639 858 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 CYP2J2P51589 502 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 HDAC4P56524 1084 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 GEMIN4P57678 1058 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 NLRP9Q7RTR0 991 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 STRA6Q9BX79 667 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 LRRC19Q9H756 370 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 WHRNQ9P202 907 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 CCNL1Q9UK58 526 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 ANGPTL2Q9UKU9 493 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 LY75O60449 1722 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 PLSCR1O15162 318 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 LRRN2O75325 713 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 SLITRK3O94933 977 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 CETPP11597 493 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 GZMAP12544 262 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 ANPEPP15144 967 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 PHLDB2Q86SQ0 1253 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 FAM178BQ8IXR5 827 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 CCDC105Q8IYK2 499 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 FNDC8Q8TC99 324 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 DNAJC18Q9H819 358 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 FAIMQ9NVQ4 179 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 ADAMTSL1Q8N6G6 1762 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 NFKBIAP25963 317 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 CRABP2P29373 138 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 ITGA9Q13797 1035 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 KLHDC10Q6PID8 442 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 PPP1R21Q6ZMI0 780 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 OTOP1Q7RTM1 612 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 TTC1Q99614 292 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 SAR1AQ9NR31 198 aa12.19□□□□□ -0.46
SEC61A1-205ENST00000483956 MYH11P35749 1972 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 CFAP69A5D8W1 941 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 TP73O15350 636 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 SPAG7O75391 227 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 TCEA3O75764 348 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 BAG2O95816 211 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 ALDH2P05091 517 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 CALCOCO2Q13137 446 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 CDC42EP5Q6NZY7 148 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 CERS5Q8N5B7 392 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 GMCL1P1Q8NEA9 526 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.463e-10■■□□□ 11.9
SEC61A1-205ENST00000483956 CYP2W1Q8TAV3 490 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 DQX1Q8TE96 717 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 GMCL1Q96IK5 515 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 COA1Q9GZY4 146 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 TCRBV7S2A1N4TA0A589 114 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 PSMD10O75832 226 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 HOXA10P31260 410 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 SERPINB8P50452 374 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 SLC45A4Q5BKX6 768 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 RHBDF2Q6PJF5 856 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 HHIPL2Q6UWX4 724 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 RIN3Q8TB24 985 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 UBE2TQ9NPD8 197 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 AAASQ9NRG9 546 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 PTPN22Q9Y2R2 807 aa12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-205ENST00000483956 EDF1O60869 148 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 CYP1A2P05177 515 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 GSTT2P0CG29 244 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 GSTT2BP0CG30 244 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 PCSK6P29122 969 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 CETN1Q12798 172 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 MESDQ14696 234 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 LRRC36Q1X8D7 754 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 EPC2Q52LR7 807 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 SLC2A7Q6PXP3 512 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 ISLR2Q6UXK2 745 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 RAPH1Q70E73 1250 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 PTCD3Q96EY7 689 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 EPB41L1Q9H4G0 881 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 NPHS2Q9NP85 383 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 TIMMDC1Q9NPL8 285 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 NDE1Q9NXR1 346 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 NOCTQ9UK39 431 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 UTRNP46939 3433 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 PMM2O15305 246 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 SERPINB7O75635 380 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms