RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SPECC1L-ADORA2AF8WAN1 911 aa15.08■□□□□ 0
VARS-226ENST00000483275 H3BQV1 296 aa15.08■□□□□ 0
VARS-226ENST00000483275 ODC1P11926 461 aa15.08■□□□□ 0
VARS-226ENST00000483275 ATF6P18850 670 aa15.08■□□□□ 0
VARS-226ENST00000483275 CYP3A5P20815 502 aa15.08■□□□□ 0
VARS-226ENST00000483275 CTHP32929 405 aa15.08■□□□□ 0
VARS-226ENST00000483275 LMNB2Q03252 620 aa15.08■□□□□ 0
VARS-226ENST00000483275 FCHO2Q0JRZ9 810 aa15.08■□□□□ 0
VARS-226ENST00000483275 PLD1Q13393 1074 aa15.08■□□□□ 0
VARS-226ENST00000483275 KARSQ15046 597 aaKnown RBP15.08■□□□□ 0
VARS-226ENST00000483275 PON2Q15165 354 aa15.08■□□□□ 0
VARS-226ENST00000483275 ZC2HC1CQ53FD0 456 aaPredicted RBP15.08■□□□□ 0
VARS-226ENST00000483275 SPATA1Q5VX52 437 aa15.08■□□□□ 0
VARS-226ENST00000483275 DNAJB7Q7Z6W7 309 aaPredicted RBP15.08■□□□□ 0
VARS-226ENST00000483275 FAM200AQ8TCP9 573 aa15.08■□□□□ 0
VARS-226ENST00000483275 GIPC2Q8TF65 315 aa15.08■□□□□ 0
VARS-226ENST00000483275 TRPV5Q9NQA5 729 aa15.08■□□□□ 0
VARS-226ENST00000483275 CPSF3Q9UKF6 684 aaKnown RBP15.08■□□□□ 0
VARS-226ENST00000483275 RAB23Q9ULC3 237 aa15.08■□□□□ 0
VARS-226ENST00000483275 MAFFQ9ULX9 164 aa15.08■□□□□ 0
VARS-226ENST00000483275 MYO16Q9Y6X6 1858 aa15.08■□□□□ 0
VARS-226ENST00000483275 USP24Q9UPU5 2620 aa15.07■□□□□ 0
VARS-226ENST00000483275 CHADO15335 359 aa15.07■□□□□ 0
VARS-226ENST00000483275 HRO43593 1189 aa15.07■□□□□ 0
VARS-226ENST00000483275 EIF5BO60841 1220 aaKnown RBP15.07■□□□□ 0
VARS-226ENST00000483275 KRT18P05783 430 aaKnown RBP15.07■□□□□ 0
VARS-226ENST00000483275 TYMPP19971 482 aa15.07■□□□□ 0
VARS-226ENST00000483275 CXCL12P48061 93 aa15.07■□□□□ 0
VARS-226ENST00000483275 TMEM132DQ14C87 1099 aa15.07■□□□□ 0
VARS-226ENST00000483275 MGAT5BQ3V5L5 792 aa15.07■□□□□ 0
VARS-226ENST00000483275 PKN3Q6P5Z2 889 aa15.07■□□□□ 0
VARS-226ENST00000483275 RASSF8Q8NHQ8 419 aa15.07■□□□□ 0
VARS-226ENST00000483275 PSMG2Q969U7 264 aa15.07■□□□□ 0
VARS-226ENST00000483275 TMX3Q96JJ7 454 aa15.07■□□□□ 0
VARS-226ENST00000483275 FAM126AQ9BYI3 521 aaPredicted RBP15.07■□□□□ 0
VARS-226ENST00000483275 KCND2Q9NZV8 630 aa15.07■□□□□ 0
VARS-226ENST00000483275 DAXXQ9UER7 740 aaPredicted RBP15.07■□□□□ 0
VARS-226ENST00000483275 ODF2LQ9ULJ1 636 aa15.07■□□□□ 0
VARS-226ENST00000483275 GREB1Q4ZG55 1949 aa15.06■□□□□ 0
VARS-226ENST00000483275 H0YCG3 227 aa15.06■□□□□ 0
VARS-226ENST00000483275 K7ESF4 209 aa15.06■□□□□ 0
VARS-226ENST00000483275 DPYSL4O14531 572 aa15.06■□□□□ 0
VARS-226ENST00000483275 XPOTO43592 962 aaKnown RBP15.06■□□□□ 0
VARS-226ENST00000483275 TBCAO75347 108 aaKnown RBP15.06■□□□□ 0
VARS-226ENST00000483275 PIGRP01833 764 aa15.06■□□□□ 0
VARS-226ENST00000483275 KCNA4P22459 653 aa15.06■□□□□ 0
VARS-226ENST00000483275 PXNP49023 591 aaPredicted RBP15.06■□□□□ 0
VARS-226ENST00000483275 ZNF131P52739 623 aa15.06■□□□□ 0
VARS-226ENST00000483275 NRLP54845 237 aa15.06■□□□□ 0
VARS-226ENST00000483275 SIM2Q14190 667 aaPredicted RBP15.06■□□□□ 0
VARS-226ENST00000483275 MYBPC2Q14324 1141 aa15.06■□□□□ 0
VARS-226ENST00000483275 LAIR1Q6GTX8 287 aa15.06■□□□□ 0
VARS-226ENST00000483275 ARMCX5Q6P1M9 558 aa15.06■□□□□ 0
VARS-226ENST00000483275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.06■□□□□ 0
VARS-226ENST00000483275 LRRTM3Q86VH5 581 aa15.06■□□□□ 0
VARS-226ENST00000483275 SPEM1Q8N4L4 309 aa15.06■□□□□ 0
VARS-226ENST00000483275 FIZ1Q96SL8 496 aa15.06■□□□□ 0
VARS-226ENST00000483275 PYM1Q9BRP8 204 aaKnown RBP15.06■□□□□ 0
VARS-226ENST00000483275 IL21Q9HBE4 155 aa15.06■□□□□ 0
VARS-226ENST00000483275 PARVGQ9HBI0 331 aa15.06■□□□□ 0
VARS-226ENST00000483275 POLR3BQ9NW08 1133 aaPredicted RBP15.06■□□□□ 0
VARS-226ENST00000483275 ABI2Q9NYB9 513 aaPredicted RBP15.06■□□□□ 0
VARS-226ENST00000483275 CEP295Q9C0D2 2601 aa15.06■□□□□ 0
VARS-226ENST00000483275 KIAA1549LQ6ZVL6 1849 aa15.06■□□□□ 0
VARS-226ENST00000483275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.05■□□□□ -0
VARS-226ENST00000483275 MYBPHLA2RUH7 354 aa15.05■□□□□ -0
VARS-226ENST00000483275 TRAK2O60296 914 aa15.05■□□□□ -0
VARS-226ENST00000483275 GDF9O60383 454 aa15.05■□□□□ -0
VARS-226ENST00000483275 UBA7P41226 1012 aa15.05■□□□□ -0
VARS-226ENST00000483275 GPR15P49685 360 aa15.05■□□□□ -0
VARS-226ENST00000483275 WNT7BP56706 349 aa15.05■□□□□ -0
VARS-226ENST00000483275 LRRC32Q14392 662 aa15.05■□□□□ -0
VARS-226ENST00000483275 PPP2R5DQ14738 602 aa15.05■□□□□ -0
VARS-226ENST00000483275 CCDC6Q16204 474 aa15.05■□□□□ -0
VARS-226ENST00000483275 CCDC142Q17RM4 750 aa15.05■□□□□ -0
VARS-226ENST00000483275 SDHAF4Q5VUM1 108 aa15.05■□□□□ -0
VARS-226ENST00000483275 WSCD1Q658N2 575 aa15.05■□□□□ -0
VARS-226ENST00000483275 ARL6IP4Q66PJ3 421 aaKnown RBP15.05■□□□□ -0
VARS-226ENST00000483275 NAIF1Q69YI7 327 aaPredicted RBP15.05■□□□□ -0
VARS-226ENST00000483275 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
VARS-226ENST00000483275 TRIM68Q6AZZ1 485 aa15.05■□□□□ -0
VARS-226ENST00000483275 EFCAB13Q8IY85 973 aa15.05■□□□□ -0
VARS-226ENST00000483275 ZSWIM2Q8NEG5 633 aa15.05■□□□□ -0
VARS-226ENST00000483275 RIN3Q8TB24 985 aa15.05■□□□□ -0
VARS-226ENST00000483275 RAD54LQ92698 747 aa15.05■□□□□ -0
VARS-226ENST00000483275 CALML4Q96GE6 196 aa15.05■□□□□ -0
VARS-226ENST00000483275 GPR88Q9GZN0 384 aa15.05■□□□□ -0
VARS-226ENST00000483275 ZCWPW1Q9H0M4 648 aa15.05■□□□□ -0
VARS-226ENST00000483275 TMLHEQ9NVH6 421 aa15.05■□□□□ -0
VARS-226ENST00000483275 CCL26Q9Y258 94 aa15.05■□□□□ -0
VARS-226ENST00000483275 KIF3AQ9Y496 699 aa15.05■□□□□ -0
VARS-226ENST00000483275 ANO9A1A5B4 782 aa15.04■□□□□ -0
VARS-226ENST00000483275 PIRO00625 290 aa15.04■□□□□ -0
VARS-226ENST00000483275 CYB561D2O14569 222 aa15.04■□□□□ -0
VARS-226ENST00000483275 EXTL3O43909 919 aa15.04■□□□□ -0
VARS-226ENST00000483275 ADRB2P07550 413 aa15.04■□□□□ -0
VARS-226ENST00000483275 VEPH1Q14D04 833 aa15.04■□□□□ -0
VARS-226ENST00000483275 RABEP1Q15276 862 aa15.04■□□□□ -0
VARS-226ENST00000483275 ARHGAP29Q52LW3 1261 aa15.04■□□□□ -0
VARS-226ENST00000483275 ARHGAP15Q53QZ3 475 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms