RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 C17orf53Q8N3J3 647 aaPredicted RBP8.81□□□□□ -1
USP4-210ENST00000483212 TOP6BLQ8N6T0 577 aa8.81□□□□□ -1
USP4-210ENST00000483212 SLC4A11Q8NBS3 891 aa8.81□□□□□ -1
USP4-210ENST00000483212 ACRBPQ8NEB7 543 aa8.81□□□□□ -1
USP4-210ENST00000483212 SLC39A7Q92504 469 aa8.81□□□□□ -1
USP4-210ENST00000483212 PCDHB18PQ96TA0 734 aa8.81□□□□□ -1
USP4-210ENST00000483212 AGPAT1Q99943 283 aa8.81□□□□□ -1
USP4-210ENST00000483212 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.81□□□□□ -1
USP4-210ENST00000483212 DESI2Q9BSY9 194 aa8.81□□□□□ -1
USP4-210ENST00000483212 MRPL9Q9BYD2 267 aaKnown RBP8.81□□□□□ -1
USP4-210ENST00000483212 CWH43Q9H720 699 aa8.81□□□□□ -1
USP4-210ENST00000483212 SPTLC3Q9NUV7 552 aa8.81□□□□□ -1
USP4-210ENST00000483212 MARCH5Q9NX47 278 aa8.81□□□□□ -1
USP4-210ENST00000483212 PCDHB4Q9Y5E5 795 aa8.81□□□□□ -1
USP4-210ENST00000483212 EPN1Q9Y6I3 576 aaPredicted RBP8.81□□□□□ -1
USP4-210ENST00000483212 A0A0U1RQJ8 604 aa8.8□□□□□ -1
USP4-210ENST00000483212 USP27XA6NNY8 438 aa8.8□□□□□ -1
USP4-210ENST00000483212 TBKBP1A7MCY6 615 aa8.8□□□□□ -1
USP4-210ENST00000483212 HCRTO43612 131 aa8.8□□□□□ -1
USP4-210ENST00000483212 NRDCO43847 1150 aa8.8□□□□□ -1
USP4-210ENST00000483212 B3GAT3O94766 335 aa8.8□□□□□ -1
USP4-210ENST00000483212 FGBP02675 491 aa8.8□□□□□ -1
USP4-210ENST00000483212 CYP11A1P05108 521 aa8.8□□□□□ -1
USP4-210ENST00000483212 MMEP08473 750 aa8.8□□□□□ -1
USP4-210ENST00000483212 CFHP08603 1231 aa8.8□□□□□ -1
USP4-210ENST00000483212 PAEPP09466 180 aa8.8□□□□□ -1
USP4-210ENST00000483212 LINC00271P0C7V0 271 aa8.8□□□□□ -1
USP4-210ENST00000483212 CCDC172P0C7W6 258 aa8.8□□□□□ -1
USP4-210ENST00000483212 CYLC1P35663 651 aaPredicted RBP8.8□□□□□ -1
USP4-210ENST00000483212 USP8P40818 1118 aa8.8□□□□□ -1
USP4-210ENST00000483212 BRCC3P46736 316 aa8.8□□□□□ -1
USP4-210ENST00000483212 SLC11A1P49279 550 aa8.8□□□□□ -1
USP4-210ENST00000483212 NDST1P52848 882 aa8.8□□□□□ -1
USP4-210ENST00000483212 YWHAEP62258 255 aaKnown RBP8.8□□□□□ -1
USP4-210ENST00000483212 CDR2Q01850 454 aa8.8□□□□□ -1
USP4-210ENST00000483212 GFPT1Q06210 699 aaPredicted RBP8.8□□□□□ -1
USP4-210ENST00000483212 BMS1Q14692 1282 aaKnown RBP8.8□□□□□ -1
USP4-210ENST00000483212 SLC18A3Q16572 532 aa8.8□□□□□ -1
USP4-210ENST00000483212 RASIP1Q5U651 963 aa8.8□□□□□ -1
USP4-210ENST00000483212 OTOP2Q7RTS6 562 aa8.8□□□□□ -1
USP4-210ENST00000483212 UNC93AQ86WB7 457 aa8.8□□□□□ -1
USP4-210ENST00000483212 GLYCTKQ8IVS8 523 aa8.8□□□□□ -1
USP4-210ENST00000483212 REXO1L1PQ8IX06 675 aa8.8□□□□□ -1
USP4-210ENST00000483212 ABI1Q8IZP0 508 aa8.8□□□□□ -1
USP4-210ENST00000483212 CCAR2Q8N163 923 aaKnown RBP8.8□□□□□ -1
USP4-210ENST00000483212 LRRC43Q8N309 656 aa8.8□□□□□ -1
USP4-210ENST00000483212 PDCL2Q8N4E4 241 aa8.8□□□□□ -1
USP4-210ENST00000483212 TTC39CQ8N584 583 aa8.8□□□□□ -1
USP4-210ENST00000483212 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
USP4-210ENST00000483212 ATRIPQ8WXE1 791 aa8.8□□□□□ -1
USP4-210ENST00000483212 HERVK_113Q902F9 699 aa8.8□□□□□ -1
USP4-210ENST00000483212 TFAP2BQ92481 460 aa8.8□□□□□ -1
USP4-210ENST00000483212 SUSD3Q96L08 255 aa8.8□□□□□ -1
USP4-210ENST00000483212 SENP8Q96LD8 212 aa8.8□□□□□ -1
USP4-210ENST00000483212 CCDC42Q96M95 316 aa8.8□□□□□ -1
USP4-210ENST00000483212 MMS19Q96T76 1030 aa8.8□□□□□ -1
USP4-210ENST00000483212 RTP3Q9BQQ7 232 aa8.8□□□□□ -1
USP4-210ENST00000483212 TMEM175Q9BSA9 504 aa8.8□□□□□ -1
USP4-210ENST00000483212 CXXC1Q9P0U4 656 aaPredicted RBP8.8□□□□□ -1
USP4-210ENST00000483212 PRKAG2Q9UGJ0 569 aa8.8□□□□□ -1
USP4-210ENST00000483212 ADAMTS1Q9UHI8 967 aa8.8□□□□□ -1
USP4-210ENST00000483212 NAGPAQ9UK23 515 aa8.8□□□□□ -1
USP4-210ENST00000483212 ZMYND8Q9ULU4 1186 aaPredicted RBP8.8□□□□□ -1
USP4-210ENST00000483212 BARX2Q9UMQ3 279 aaPredicted RBP8.8□□□□□ -1
USP4-210ENST00000483212 R3HCC1Q9Y3T6 440 aaKnown RBP8.8□□□□□ -1
USP4-210ENST00000483212 RCCD1A6NED2 376 aa8.79□□□□□ -1
USP4-210ENST00000483212 CCDC85CA6NKD9 419 aa8.79□□□□□ -1
USP4-210ENST00000483212 I3L4J1 428 aa8.79□□□□□ -1
USP4-210ENST00000483212 CYB561D2O14569 222 aa8.79□□□□□ -1
USP4-210ENST00000483212 NRP1O14786 923 aa8.79□□□□□ -1
USP4-210ENST00000483212 HUS1O60921 280 aa8.79□□□□□ -1
USP4-210ENST00000483212 CLSTN1O94985 981 aa8.79□□□□□ -1
USP4-210ENST00000483212 UPP2O95045 317 aa8.79□□□□□ -1
USP4-210ENST00000483212 CYP1A1P04798 512 aaPredicted RBP8.79□□□□□ -1
USP4-210ENST00000483212 GALTP07902 379 aa8.79□□□□□ -1
USP4-210ENST00000483212 BRD2P25440 801 aaKnown RBP8.79□□□□□ -1
USP4-210ENST00000483212 LMO2P25791 158 aa8.79□□□□□ -1
USP4-210ENST00000483212 GNA15P30679 374 aa8.79□□□□□ -1
USP4-210ENST00000483212 ARHGAP25P42331 645 aa8.79□□□□□ -1
USP4-210ENST00000483212 OR1G1P47890 313 aa8.79□□□□□ -1
USP4-210ENST00000483212 PDE6CP51160 858 aa8.79□□□□□ -1
USP4-210ENST00000483212 BPIFB4P59827 614 aa8.79□□□□□ -1
USP4-210ENST00000483212 HTRA4P83105 476 aaPredicted RBP8.79□□□□□ -1
USP4-210ENST00000483212 CYP27A1Q02318 531 aa8.79□□□□□ -1
USP4-210ENST00000483212 ORC1Q13415 861 aa8.79□□□□□ -1
USP4-210ENST00000483212 PAN2Q504Q3 1202 aaKnown RBP8.79□□□□□ -1
USP4-210ENST00000483212 ZNF394Q53GI3 561 aa8.79□□□□□ -1
USP4-210ENST00000483212 KIAA0319Q5VV43 1072 aa8.79□□□□□ -1
USP4-210ENST00000483212 TAF3Q5VWG9 929 aa8.79□□□□□ -1
USP4-210ENST00000483212 WSCD1Q658N2 575 aa8.79□□□□□ -1
USP4-210ENST00000483212 PSRC1Q6PGN9 363 aaPredicted RBP8.79□□□□□ -1
USP4-210ENST00000483212 ZNF662Q6ZS27 426 aa8.79□□□□□ -1
USP4-210ENST00000483212 TMEM173Q86WV6 379 aaPredicted RBP8.79□□□□□ -1
USP4-210ENST00000483212 ZNF677Q86XU0 584 aa8.79□□□□□ -1
USP4-210ENST00000483212 CMTR2Q8IYT2 770 aaKnown RBP8.79□□□□□ -1
USP4-210ENST00000483212 RNF168Q8IYW5 571 aaPredicted RBP8.79□□□□□ -1
USP4-210ENST00000483212 ADGRF2Q8IZF7 708 aa8.79□□□□□ -1
USP4-210ENST00000483212 CRYBG2Q8N1P7 616 aa8.79□□□□□ -1
USP4-210ENST00000483212 APPL2Q8NEU8 664 aa8.79□□□□□ -1
USP4-210ENST00000483212 SPATA18Q8TC71 538 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms