RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 TBC1D17Q9HA65 648 aa21.43■■□□□ 1.02
MSH5-215ENST00000482280 EXOC1Q9NV70 894 aa21.43■■□□□ 1.02
MSH5-215ENST00000482280 CEP72Q9P209 647 aa21.43■■□□□ 1.02
MSH5-215ENST00000482280 CGNQ9P2M7 1197 aaKnown RBP21.43■■□□□ 1.02
MSH5-215ENST00000482280 MYL7Q01449 175 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 DUOXA2Q1HG44 320 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 PRSS36Q5K4E3 855 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 CWF19L1Q69YN2 538 aaKnown RBP21.42■■□□□ 1.02
MSH5-215ENST00000482280 HS6ST3Q8IZP7 471 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 TMEM86AQ8N2M4 240 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 C1orf127Q8N9H9 656 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 GLIS3Q8NEA6 775 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 ZSWIM2Q8NEG5 633 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 GOLGA5Q8TBA6 731 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 SPPL2BQ8TCT7 592 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 ELSPBP1Q96BH3 223 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 GCNAQ96QF7 691 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 RPP25Q9BUL9 199 aaKnown RBP21.42■■□□□ 1.02
MSH5-215ENST00000482280 SCAND2PQ9GZW5 306 aaPredicted RBP21.42■■□□□ 1.02
MSH5-215ENST00000482280 ZCWPW1Q9H0M4 648 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 SLC39A2Q9NP94 309 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 SERTAD1Q9UHV2 236 aa21.42■■□□□ 1.02
MSH5-215ENST00000482280 KRBA1A5PL33 1030 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 H0Y858 1186 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 PRPF40AO75400 957 aaKnown RBP21.41■■□□□ 1.02
MSH5-215ENST00000482280 TNNI1P19237 187 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 CMA1P23946 247 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 HOXD11P31277 338 aaPredicted RBP21.41■■□□□ 1.02
MSH5-215ENST00000482280 CYP2J2P51589 502 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 CUL4BQ13620 913 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 SNRNP35Q16560 246 aaKnown RBP21.41■■□□□ 1.02
MSH5-215ENST00000482280 ARHGAP15Q53QZ3 475 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 PHLDB3Q6NSJ2 640 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 EPM2AIP1Q7L775 607 aaPredicted RBP21.41■■□□□ 1.02
MSH5-215ENST00000482280 ALYREFQ86V81 257 aaKnown RBP21.41■■□□□ 1.02
MSH5-215ENST00000482280 CBWD2Q8IUF1 395 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 XXYLT1Q8NBI6 393 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 RDH13Q8NBN7 331 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 OR10T2Q8NGX3 314 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 LEO1Q8WVC0 666 aaPredicted RBP21.41■■□□□ 1.02
MSH5-215ENST00000482280 TCEAL4Q96EI5 215 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 CCDC34Q96HJ3 373 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 TMEM209Q96SK2 561 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 AGPAT3Q9NRZ7 376 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 ABI2Q9NYB9 513 aaPredicted RBP21.41■■□□□ 1.02
MSH5-215ENST00000482280 SNX9Q9Y5X1 595 aa21.41■■□□□ 1.02
MSH5-215ENST00000482280 CLSTN1O94985 981 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 DLATP10515 647 aaKnown RBP21.4■■□□□ 1.02
MSH5-215ENST00000482280 PFKFB1P16118 471 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 NPR3P17342 541 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 CASP1P29466 404 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 TCF15Q12870 199 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 NFE2Q16621 373 aaPredicted RBP21.4■■□□□ 1.02
MSH5-215ENST00000482280 WDR49Q8IV35 697 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 SMARCD2Q92925 531 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 SIT1Q9Y3P8 196 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 PCDHB5Q9Y5E4 795 aa21.4■■□□□ 1.02
MSH5-215ENST00000482280 A0A1B0GVL5 298 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 CLIC2O15247 247 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 MYL1P05976 194 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 LHX1P48742 406 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 MRE11P49959 708 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 EPHA5P54756 1037 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 WNT7BP56706 349 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 PRKCQQ04759 706 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 PSMD2Q13200 908 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 SNW1Q13573 536 aaKnown RBP21.39■■□□□ 1.01
MSH5-215ENST00000482280 TEAD2Q15562 447 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 MLF2Q15773 248 aaPredicted RBP21.39■■□□□ 1.01
MSH5-215ENST00000482280 KNOP1Q1ED39 458 aaKnown RBP21.39■■□□□ 1.01
MSH5-215ENST00000482280 FAM78AQ5JUQ0 283 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 YAF2Q8IY57 180 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 SCFD1Q8WVM8 642 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 PSMG2Q969U7 264 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 E2F7Q96AV8 911 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 PAGE5Q96GU1 130 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 TRMT61BQ9BVS5 477 aaKnown RBP21.39■■□□□ 1.01
MSH5-215ENST00000482280 ATXN3LQ9H3M9 355 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 BRD9Q9H8M2 597 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 DDX43Q9NXZ2 648 aaKnown RBP21.39■■□□□ 1.01
MSH5-215ENST00000482280 TRIOO75962 3097 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 KMT2EQ8IZD2 1858 aa21.39■■□□□ 1.01
MSH5-215ENST00000482280 ZNF318Q5VUA4 2279 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 A0A1W2PRU2 124 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 EXOC3O60645 756 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 KIF20AO95235 890 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 GJA1P17302 382 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 PCSK1P29120 753 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 CCR2P41597 374 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 SYKP43405 635 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 SLC44A4Q53GD3 710 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 LMBRD2Q68DH5 695 aaPredicted RBP21.38■■□□□ 1.01
MSH5-215ENST00000482280 TANGO2Q6ICL3 276 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 DNAJB7Q7Z6W7 309 aaPredicted RBP21.38■■□□□ 1.01
MSH5-215ENST00000482280 CCDC105Q8IYK2 499 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 GRAMD1CQ8IYS0 662 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 ADGRF2Q8IZF7 708 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 PDCL2Q8N4E4 241 aa21.38■■□□□ 1.01
MSH5-215ENST00000482280 TOP6BLQ8N6T0 577 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms