RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 DNAJC5GQ8N7S2 189 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 FAM46DQ8NEK8 389 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 IL17DQ8TAD2 202 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 TNIP3Q96KP6 325 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 CCDC138Q96M89 665 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 CNPPD1Q9BV87 410 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 SPATA5L1Q9BVQ7 753 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 ZNF518BQ9C0D4 1074 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 REXO4Q9GZR2 422 aaKnown RBP7.02□□□□□ -1.29
SF3B1-210ENST00000482158 RNPEPQ9H4A4 650 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 NLRC4Q9NPP4 1024 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 TRPM5Q9NZQ8 1165 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 CEP72Q9P209 647 aa7.02□□□□□ -1.29
SF3B1-210ENST00000482158 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.02□□□□□ -1.29
SF3B1-210ENST00000482158 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 FOXN3O00409 490 aaPredicted RBP7.01□□□□□ -1.29
SF3B1-210ENST00000482158 DCLK1O15075 740 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 MUSKO15146 869 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 SCAF4O95104 1147 aaKnown RBP7.01□□□□□ -1.29
SF3B1-210ENST00000482158 IL18RAPO95256 599 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 NR4A1P22736 598 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 TNFSF4P23510 183 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 SLC25A3Q00325 362 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 MORC3Q14149 939 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 B3GNTL1Q67FW5 361 aaPredicted RBP7.01□□□□□ -1.29
SF3B1-210ENST00000482158 LMBRD2Q68DH5 695 aaPredicted RBP7.01□□□□□ -1.29
SF3B1-210ENST00000482158 TAPT1Q6NXT6 567 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 DPP9Q86TI2 863 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 SKAP1Q86WV1 359 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 LIX1LQ8IVB5 337 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 MAPKAPK5Q8IW41 473 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 OR56A3Q8NH54 315 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 POC1BQ8TC44 478 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 CPT1CQ8TCG5 803 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 EXTL1Q92935 676 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 C1QTNF3Q9BXJ4 246 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 XPR1Q9UBH6 696 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 HESX1Q9UBX0 185 aa7.01□□□□□ -1.29
SF3B1-210ENST00000482158 POM121BA6NF01 834 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 FAM20BO75063 409 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 VPS4BO75351 444 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 SUN1O94901 812 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 CFIP05156 583 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 IL1R1P14778 569 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 MAGEA10P43363 369 aaPredicted RBP7□□□□□ -1.29
SF3B1-210ENST00000482158 STT3AP46977 705 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 MC2RQ01718 297 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 EFEMP1Q12805 493 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7□□□□□ -1.29
SF3B1-210ENST00000482158 PALM2Q8IXS6 379 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 OR2C3Q8N628 320 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 DVL3Q92997 716 aaPredicted RBP7□□□□□ -1.29
SF3B1-210ENST00000482158 TRIB1Q96RU8 372 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 SLC46A2Q9BY10 475 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 SIK2Q9H0K1 926 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 ZNF703Q9H7S9 590 aaPredicted RBP7□□□□□ -1.29
SF3B1-210ENST00000482158 TMX2Q9Y320 296 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 DAAM1Q9Y4D1 1078 aa7□□□□□ -1.29
SF3B1-210ENST00000482158 CCDC195A0A1B0GUA6 201 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 PYCARD-AS1I3L0S3 204 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 POLRMTO00411 1230 aaKnown RBP6.99□□□□□ -1.29
SF3B1-210ENST00000482158 LDHAP00338 332 aaKnown RBP6.99□□□□□ -1.29
SF3B1-210ENST00000482158 ZNF20P17024 532 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 PIGFQ07326 219 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 ZNF844Q08AG5 666 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 RAB32Q13637 225 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 FAM209BQ5JX69 171 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 SPDYAQ5MJ70 313 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 KLHDC7AQ5VTJ3 777 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 DCAF12L1Q5VU92 463 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 TAF2Q6P1X5 1199 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 SLC30A10Q6XR72 485 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 TMEM132CQ8N3T6 1108 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 PSD4Q8NDX1 1056 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 NACC2Q96BF6 587 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 ZC3H10Q96K80 434 aaKnown RBP6.99□□□□□ -1.29
SF3B1-210ENST00000482158 MED15Q96RN5 788 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 SMOQ99835 787 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 COLEC11Q9BWP8 271 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 BRIP1Q9BX63 1249 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 SMOC2Q9H3U7 446 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 PNPLA8Q9NP80 782 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 STARD7Q9NQZ5 370 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 AURKAIP1Q9NWT8 199 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-210ENST00000482158 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 MAP3K2Q9Y2U5 619 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 COMMD10Q9Y6G5 202 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 FPGT-TNNI3KV9GXZ4 949 aa6.99□□□□□ -1.29
SF3B1-210ENST00000482158 NCR1O76036 304 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 RECQL4O94761 1208 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 GPANK1O95872 356 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 PARP1P09874 1014 aaKnown RBP6.98□□□□□ -1.29
SF3B1-210ENST00000482158 KCNA2P16389 499 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 CHRM3P20309 590 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 VIPR2P41587 438 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 ADAM17P78536 824 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 USP39Q53GS9 565 aaKnown RBP6.98□□□□□ -1.29
SF3B1-210ENST00000482158 HIBCHQ6NVY1 386 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-210ENST00000482158 DEPTORQ8TB45 409 aa6.98□□□□□ -1.29
SF3B1-210ENST00000482158 KIAA1191Q96A73 305 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms