RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 C11orf63Q6NUN7 778 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 DPH6Q7L8W6 267 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 CXorf38Q8TB03 319 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 CD101Q93033 1021 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 ANKRD36BP1Q96IX9 119 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 APOL6Q9BWW8 343 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 NFKBIZQ9BYH8 718 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 NEUROG2Q9H2A3 272 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 TLL2Q9Y6L7 1015 aa15.36■□□□□ 0.05
CHD3-211ENST00000481999 H0YGN5 161 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 PPEF2O14830 753 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 F2P00734 622 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 TNNC2P02585 160 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 MYL3P08590 195 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 TBXAS1P24557 533 aaPredicted RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 POLR2BP30876 1174 aaKnown RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 LSP1P33241 339 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 GJC1P36383 396 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 HADHBP55084 474 aaKnown RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 UAP1Q16222 522 aaPredicted RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 SGSM1Q2NKQ1 1148 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 CYP4A22Q5TCH4 519 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 B4GALNT4Q76KP1 1039 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 C18orf8Q96DM3 657 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 HERPUD2Q9BSE4 406 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 KLHL11Q9NVR0 708 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 ADAM22Q9P0K1 906 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 GJD2Q9UKL4 321 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 NFS1Q9Y697 457 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 FAM169AQ9Y6X4 670 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 SCN1AP35498 2009 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 CITO14578 2027 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 A0A087WUV0 522 aaPredicted RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 GOLGA6L10A0A0M3HER8 536 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 ANKRD65E5RJM6 399 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 TNPO2O14787 897 aaKnown RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 NPTXRO95502 500 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 POU5F1Q01860 360 aaKnown RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 WDTC1Q8N5D0 677 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 ZMAT2Q96NC0 199 aaKnown RBP15.35■□□□□ 0.05
CHD3-211ENST00000481999 RAB17Q9H0T7 212 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 ADAMTS10Q9H324 1103 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 RABEP2Q9H5N1 569 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 CNTN6Q9UQ52 1028 aa15.35■□□□□ 0.05
CHD3-211ENST00000481999 SRRM3A6NNA2 597 aaPredicted RBP15.34■□□□□ 0.05
CHD3-211ENST00000481999 FAM155AB1AL88 458 aaPredicted RBP15.34■□□□□ 0.05
CHD3-211ENST00000481999 GPR32O75388 356 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
CHD3-211ENST00000481999 CD19P15391 556 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 MDH1P40925 334 aaKnown RBP15.34■□□□□ 0.05
CHD3-211ENST00000481999 GUCY1A3Q02108 690 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 ZNF844Q08AG5 666 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 PTP4A2Q12974 167 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 TRIM32Q13049 653 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 SPATS2Q86XZ4 545 aaKnown RBP15.34■□□□□ 0.05
CHD3-211ENST00000481999 FAM118BQ9BPY3 351 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 EPN3Q9H201 632 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 DPH5Q9H2P9 285 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 SNTG2Q9NY99 539 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 USTQ9Y2C2 406 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 A0A1B0GUA9 196 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 CYP2C9P11712 490 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 AKAP5P24588 427 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 FLT3P36888 993 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 MAMLD1Q13495 774 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 MFSD10Q14728 455 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 TMC3Q7Z5M5 1100 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 TRPV1Q8NER1 839 aa15.34■□□□□ 0.05
CHD3-211ENST00000481999 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
CHD3-211ENST00000481999 MANSC4A6NHS7 340 aaPredicted RBP15.33■□□□□ 0.04
CHD3-211ENST00000481999 PIK3R2O00459 728 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 MTA2O94776 668 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 TCEAL1Q15170 157 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 FAM187BQ17R55 369 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 ANKS1BQ7Z6G8 1248 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 UBLCP1Q8WVY7 318 aaPredicted RBP15.33■□□□□ 0.04
CHD3-211ENST00000481999 USP6NLQ92738 828 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 ACSF2Q96CM8 615 aaPredicted RBP15.33■□□□□ 0.04
CHD3-211ENST00000481999 CENPHQ9H3R5 247 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 GABRQQ9UN88 632 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 AGAP1Q9UPQ3 857 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 MIF4GDA9UHW6 222 aaKnown RBP15.33■□□□□ 0.04
CHD3-211ENST00000481999 HCRTO43612 131 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 PGK1P00558 417 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 MCF2P10911 925 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 KCNJ1P48048 391 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 BPIFB4P59827 614 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 PTGISQ16647 500 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 TADA2BQ86TJ2 420 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 C18orf25Q96B23 403 aaPredicted RBP15.33■□□□□ 0.04
CHD3-211ENST00000481999 SLC5A4Q9NY91 659 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 KLK14Q9P0G3 267 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 UVRAGQ9P2Y5 699 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 COL1A2P08123 1366 aa15.33■□□□□ 0.04
CHD3-211ENST00000481999 ATXN2Q99700 1313 aaKnown RBP15.32■□□□□ 0.04
CHD3-211ENST00000481999 HSPA6P17066 643 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms