RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 AKAP3O75969 853 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 THP07101 528 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 SPATA31D3P0C874 917 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 CXCL8P10145 99 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 EPB41P11171 864 aaKnown RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 EEF1GP26641 437 aaKnown RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 CA8P35219 290 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 PNPLA4P41247 253 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 PMS1P54277 932 aaKnown RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 MYL5Q02045 173 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 SPAG1Q07617 926 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 ELAVL2Q12926 359 aaKnown RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 BFSP1Q12934 665 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 ADAM9Q13443 819 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 HTR4Q13639 388 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 CDKAL1Q5VV42 579 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 ANKRD40Q6AI12 368 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 SPATA31D4Q6ZUB0 917 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 LIMS2Q7Z4I7 341 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 PALB2Q86YC2 1186 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 FAM114A1Q8IWE2 563 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 TRIM59Q8IWR1 403 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 NELFCDQ8IXH7 590 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 SMYD4Q8IYR2 804 aaPredicted RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 CSGALNACT2Q8N6G5 542 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 DTWD2Q8NBA8 298 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 TAF4BQ92750 862 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 CGRRF1Q99675 332 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 RPP25Q9BUL9 199 aaKnown RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 DDX23Q9BUQ8 820 aaKnown RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 OXCT2Q9BYC2 517 aaPredicted RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 INTS13Q9NVM9 706 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 FBXW11Q9UKB1 542 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 ZFP37Q9Y6Q3 630 aaPredicted RBP9.61□□□□□ -0.87
DDX56-211ENST00000479602 SPTBN2O15020 2390 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 EPG5Q9HCE0 2579 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 ARHGEF37A1IGU5 675 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 SHISA7A6NL88 538 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 ADAM12O43184 909 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 TBC1D4O60343 1298 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 SRFP11831 508 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 GLULP15104 373 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 ZNF18P17022 549 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 RPL17P18621 184 aaKnown RBP9.6□□□□□ -0.87
DDX56-211ENST00000479602 FGFR3P22607 806 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 HOXA9P31269 272 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 STARD6P59095 220 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 CREMQ03060 361 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 RAB33AQ14088 237 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 TMEM132DQ14C87 1099 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 UPP1Q16831 310 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 ZACNQ401N2 412 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 RSPO2Q6UXX9 243 aaPredicted RBP9.6□□□□□ -0.87
DDX56-211ENST00000479602 RTL10Q7L3V2 364 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 CBWD2Q8IUF1 395 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 FAM186BQ8IYM0 893 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 SIX5Q8N196 739 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 BEST2Q8NFU1 509 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 RIN2Q8WYP3 895 aaPredicted RBP9.6□□□□□ -0.87
DDX56-211ENST00000479602 SMG7Q92540 1137 aaKnown RBP9.6□□□□□ -0.87
DDX56-211ENST00000479602 RABGGTAQ92696 567 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 ERCC4Q92889 916 aaPredicted RBP9.6□□□□□ -0.87
DDX56-211ENST00000479602 SLC35C1Q96A29 364 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 ZMAT2Q96NC0 199 aaKnown RBP9.6□□□□□ -0.87
DDX56-211ENST00000479602 TTPALQ9BTX7 342 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 CACNG4Q9UBN1 327 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 ARMCX3Q9UH62 379 aaPredicted RBP9.6□□□□□ -0.87
DDX56-211ENST00000479602 C2orf16Q68DN1 1984 aa9.6□□□□□ -0.87
DDX56-211ENST00000479602 MTCL1Q9Y4B5 1905 aaKnown RBP9.59□□□□□ -0.87
DDX56-211ENST00000479602 LACTBL1A8MY62 500 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 M0QZQ0 153 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 BIN1O00499 593 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 PIRO00625 290 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 TADA2AO75478 443 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 KIF4AO95239 1232 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 HNRNPA1P09651 372 aaKnown RBP eCLIP9.59□□□□□ -0.87
DDX56-211ENST00000479602 ATICP31939 592 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 TNFSF9P41273 254 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 ACOT2P49753 483 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 MRPL58Q14197 206 aaKnown RBP9.59□□□□□ -0.87
DDX56-211ENST00000479602 NCAPHQ15003 741 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 ANGPT1Q15389 498 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 DUOXA2Q1HG44 320 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 ZBTB41Q5SVQ8 909 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 C1orf220Q5T0J3 134 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 PDXDC1Q6P996 788 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 DCLRE1AQ6PJP8 1040 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 PRSS55Q6UWB4 352 aaPredicted RBP9.59□□□□□ -0.87
DDX56-211ENST00000479602 LRSAM1Q6UWE0 723 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 DPH6Q7L8W6 267 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 IRF2BP1Q8IU81 584 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 EFCAB13Q8IY85 973 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 MAML2Q8IZL2 1156 aaPredicted RBP9.59□□□□□ -0.87
DDX56-211ENST00000479602 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 GPR152Q8TDT2 470 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 FGF14Q92915 247 aa9.59□□□□□ -0.87
DDX56-211ENST00000479602 ZNF560Q96MR9 790 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms