RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 APBB2Q92870 758 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 SECISBP2LQ93073 1101 aaKnown RBP6.77□□□□□ -1.33
SF3B1-209ENST00000479532 NKD1Q969G9 470 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 GAL3ST3Q96A11 431 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 CEP89Q96ST8 783 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 PPP1R16BQ96T49 567 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 RUSC1Q9BVN2 902 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 MTIF3Q9H2K0 278 aaKnown RBP6.77□□□□□ -1.33
SF3B1-209ENST00000479532 GOLPH3LQ9H4A5 285 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 PARVGQ9HBI0 331 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 KMT5AQ9NQR1 393 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 XPNPEP1Q9NQW7 623 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 OGFRQ9NZT2 677 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 SEL1LQ9UBV2 794 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ZMYND8Q9ULU4 1186 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-209ENST00000479532 LTBP2Q14767 1821 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 A0A087WZ62 844 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 A0A087X0B3 334 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 FAM221AA4D161 298 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 TRIM43BA6NCK2 446 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 FSCN2O14926 492 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 EFCAB14O75071 495 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 RPS6KA5O75582 802 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 STK10O94804 968 aaKnown RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 SMC2O95347 1197 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 PLS3P13797 630 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 SYN1P17600 705 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 GLRA2P23416 452 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 AFMP43652 599 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 SOX9P48436 509 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 EFNA5P52803 228 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 PEX3P56589 373 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 POU5F1BQ06416 359 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 MGAT3Q09327 533 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 STRN3Q13033 797 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 ALCAMQ13740 583 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 CAPSQ13938 189 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 GIT2Q14161 759 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 MAPK6Q16659 721 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 LONRF3Q496Y0 759 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 SEZ6Q53EL9 994 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 HERC4Q5GLZ8 1057 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 PSRC1Q6PGN9 363 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 APBB1IPQ7Z5R6 666 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 DEFB128Q7Z7B8 93 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 FAM178BQ8IXR5 827 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 WNT8BQ93098 351 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 SYAP1Q96A49 352 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 TRIM43Q96BQ3 446 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 ZBTB10Q96DT7 871 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 PAGE5Q96GU1 130 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 SCLYQ96I15 445 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 CTAGE1Q96RT6 745 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 UBL7Q96S82 380 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 C7orf25Q9BPX7 421 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 REEP2Q9BRK0 252 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 FDXACB1Q9BRP7 624 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 FTHL17Q9BXU8 183 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 LRRC3Q9BY71 257 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 NFKBIZQ9BYH8 718 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 C7orf69Q9H7B7 122 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 IL23AQ9NPF7 189 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 GPRC5CQ9NQ84 441 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 EXOC1Q9NV70 894 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 PANK4Q9NVE7 773 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 RMND1Q9NWS8 449 aa6.76□□□□□ -1.33
SF3B1-209ENST00000479532 R3HCC1Q9Y3T6 440 aaKnown RBP6.76□□□□□ -1.33
SF3B1-209ENST00000479532 NPHP3-ACAD11A0A0J9YXS1 232 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 PVALEFA0A1B0GWK0 134 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 MYMKA6NI61 221 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 DBX1A6NMT0 343 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 INO80B-WBP1J3KQ70 363 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 K7ENM7 598 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 K7ERI5 159 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 GPR32O75388 356 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 ECEL1O95672 775 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 CHRNA1P02708 482 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 GHRP10912 638 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 DARSP14868 501 aaKnown RBP6.75□□□□□ -1.33
SF3B1-209ENST00000479532 LIG1P18858 919 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 AXLP30530 894 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 PTENP60484 403 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 DRP2Q13474 957 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 COL9A2Q14055 689 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-209ENST00000479532 MPP2Q14168 576 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 POSTNQ15063 836 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 ARSHQ5FYA8 562 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 FBXO47Q5MNV8 452 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 CNNM4Q6P4Q7 775 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 CNKSR3Q6P9H4 555 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 UNC13DQ70J99 1090 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 DPH6Q7L8W6 267 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 CATSPER4Q7RTX7 472 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 KSR1Q8IVT5 923 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 SLITRK4Q8IW52 837 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 ELOA2Q8IYF1 753 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-209ENST00000479532 STAMQ92783 540 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 BADQ92934 168 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 BICD1Q96G01 975 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms