RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 LBHD1Q9BQE6 289 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 PRMT7Q9NVM4 692 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 MAP3K20Q9NYL2 800 aaKnown RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 MYCP01106 439 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 TOB1P50616 345 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 DAB2IPQ5VWQ8 1189 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 C20orf96Q9NUD7 363 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 CHORDC1Q9UHD1 332 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 PTPRMP28827 1452 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 AKAP10O43572 662 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 DAB2P98082 770 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 IER5Q5VY09 327 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 CALML6Q8TD86 181 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 THAP11Q96EK4 314 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 DDX50Q9BQ39 737 aaKnown RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 TBX20Q9UMR3 447 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 AIM2O14862 343 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 LRRC34Q8IZ02 419 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 FAM71DQ8N9W8 422 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 FAM49BQ9NUQ9 324 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 CDYLQ9Y232 598 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 DUSP10Q9Y6W6 482 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 E9PCH4 1651 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 CCDC78A2IDD5 438 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 PSTPIP1O43586 416 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 ADCY3O60266 1144 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 CHRNA5P30532 468 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 DNAJC3Q13217 504 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 C6orf10Q5SRN2 563 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 FOXN3O00409 490 aaPredicted RBP20.49■□□□□ 0.87
ABCA2-217ENST00000479446 STIP1P31948 543 aaKnown RBP20.49■□□□□ 0.87
ABCA2-217ENST00000479446 MFSD14CQ5VZR4 134 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 SH3GL3Q99963 347 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 RUSC1Q9BVN2 902 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 TARS2Q9BW92 718 aaKnown RBP20.49■□□□□ 0.87
ABCA2-217ENST00000479446 MAP3K10Q02779 954 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 BOLA3Q53S33 107 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 MOXD1Q6UVY6 613 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 MYCBPAPQ8TBZ2 947 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 CHD1O14646 1710 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 MTSS1O43312 755 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 SRP72O76094 671 aaKnown RBP20.49■□□□□ 0.87
ABCA2-217ENST00000479446 ZC3H12BQ5HYM0 836 aaKnown RBP20.49■□□□□ 0.87
ABCA2-217ENST00000479446 CDKAL1Q5VV42 579 aa20.49■□□□□ 0.87
ABCA2-217ENST00000479446 C16orf96A6NNT2 1141 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 KRT16P08779 473 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 SERPINB10P48595 397 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 TMEM154Q6P9G4 183 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 ADNPQ9H2P0 1102 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 H0Y626 953 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 TRIM16O95361 564 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 BRD2P25440 801 aaKnown RBP20.48■□□□□ 0.87
ABCA2-217ENST00000479446 MTM1Q13496 603 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 PRPF39Q86UA1 669 aaKnown RBP20.48■□□□□ 0.87
ABCA2-217ENST00000479446 MICALL2Q8IY33 904 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 METTL5Q9NRN9 209 aaKnown RBP20.48■□□□□ 0.87
ABCA2-217ENST00000479446 GH1P01241 217 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 EFHC1Q5JVL4 640 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 THEMIS2Q5TEJ8 643 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 SH3KBP1Q96B97 665 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 LMTK2Q8IWU2 1503 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 PCYT1AP49585 367 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 NLRP11P59045 1033 aaKnown RBP20.48■□□□□ 0.87
ABCA2-217ENST00000479446 CUL2Q13617 745 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 CHI3L2Q15782 390 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 NUP93Q8N1F7 819 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 GJD4Q96KN9 370 aaPredicted RBP20.48■□□□□ 0.87
ABCA2-217ENST00000479446 TRIM49D1C9J1S8 452 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 NDUFS3O75489 264 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 ZNF555Q8NEP9 628 aa20.48■□□□□ 0.87
ABCA2-217ENST00000479446 PABPC5Q96DU9 382 aaKnown RBP20.48■□□□□ 0.87
ABCA2-217ENST00000479446 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.48■□□□□ 0.878e-7■■■■■ 28.2
ABCA2-217ENST00000479446 DPYSL4O14531 572 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 CDH2P19022 906 aaPredicted RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 MRPS35P82673 323 aaKnown RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 LACRTQ9GZZ8 138 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 GTPBP10A4D1E9 387 aaKnown RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 SUPT3HO75486 399 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 HNRNPH1P31943 449 aaKnown RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 RRM2BQ7LG56 351 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 C1orf131Q8NDD1 294 aaKnown RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 ACTRT1Q8TDG2 376 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 DDX5P17844 614 aaKnown RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 KCNA4P22459 653 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 LINC00116Q8NCU8 138 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 CPS1P31327 1500 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 HIST1H2AGP0C0S8 130 aaPredicted RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 HIST1H2ADP20671 130 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 UBA3Q8TBC4 463 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 ZNF507Q8TCN5 953 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 HIST1H2AHQ96KK5 128 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 HIST1H2AJQ99878 128 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 H2AFJQ9BTM1 129 aa20.47■□□□□ 0.87
ABCA2-217ENST00000479446 FRMD8P1Q9BZ68 369 aaPredicted RBP20.47■□□□□ 0.87
ABCA2-217ENST00000479446 APOA1P02647 267 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms