RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 ELF1P32519 619 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 PPM1LQ5SGD2 360 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 C1orf220Q5T0J3 134 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 WSCD1Q658N2 575 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 LMBRD2Q68DH5 695 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 TTI2Q6NXR4 508 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 TMC5Q6UXY8 1006 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 SV2AQ7L0J3 742 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 FILIP1Q7Z7B0 1213 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 GLYCTKQ8IVS8 523 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 C12orf76Q8N812 135 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 MLKLQ8NB16 471 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 ZCWPW1Q9H0M4 648 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 METTL14Q9HCE5 456 aaKnown RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 WDR6Q9NNW5 1121 aaKnown RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 NR2E1Q9Y466 385 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-217ENST00000479161 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 PMS1P54277 932 aaKnown RBP16.61■□□□□ 0.25
C9orf3-217ENST00000479161 TRPC3Q13507 836 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 SOWAHAQ2M3V2 549 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 SGSM1Q2NKQ1 1148 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 TDRD10Q5VZ19 366 aaKnown RBP16.61■□□□□ 0.25
C9orf3-217ENST00000479161 FRMD5Q7Z6J6 570 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 GJD3Q8N144 294 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 NUP62CLQ9H1M0 184 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 FAM124BQ9H5Z6 455 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-217ENST00000479161 L1RE1Q9UN81 338 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 SNX9Q9Y5X1 595 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 MYO10Q9HD67 2058 aa16.61■□□□□ 0.25
C9orf3-217ENST00000479161 NOTCH4Q99466 2003 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 PMM2O15305 246 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 PHACTR2O75167 634 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 RFPL2O75678 378 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 GNA14O95837 355 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 MBD3O95983 291 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 SPATA31D3P0C874 917 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 CPB1P15086 417 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 WARSP23381 471 aaKnown RBP16.6■□□□□ 0.25
C9orf3-217ENST00000479161 PCSK1P29120 753 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 MARSP56192 900 aaKnown RBP16.6■□□□□ 0.25
C9orf3-217ENST00000479161 DLG4P78352 724 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 MYL7Q01449 175 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 NCOA4Q13772 614 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 CAMK4Q16566 473 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 NFE2Q16621 373 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-217ENST00000479161 RBM43Q6ZSC3 357 aaKnown RBP16.6■□□□□ 0.25
C9orf3-217ENST00000479161 SPATA31D4Q6ZUB0 917 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 DCP1BQ8IZD4 617 aaKnown RBP16.6■□□□□ 0.25
C9orf3-217ENST00000479161 ZDHHC14Q8IZN3 488 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 SLC7A14Q8TBB6 771 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 SPPL2BQ8TCT7 592 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 SMG7Q92540 1137 aaKnown RBP16.6■□□□□ 0.25
C9orf3-217ENST00000479161 POMKQ9H5K3 350 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 TMEM8AQ9HCN3 771 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 ABCB6Q9NP58 842 aa16.6■□□□□ 0.25
C9orf3-217ENST00000479161 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-217ENST00000479161 TNFRSF10AO00220 468 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 MICAL2O94851 1124 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 VNN1O95497 513 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 FGFR1OPO95684 399 aaKnown RBP16.59■□□□□ 0.25
C9orf3-217ENST00000479161 ASS1P00966 412 aaKnown RBP16.59■□□□□ 0.25
C9orf3-217ENST00000479161 P4HA1P13674 534 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 TUFMP49411 452 aaKnown RBP16.59■□□□□ 0.25
C9orf3-217ENST00000479161 TSPY1Q01534 308 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 ADCY1Q08828 1119 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 PAK1Q13153 545 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 PLD1Q13393 1074 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 BIRC3Q13489 604 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 WDR72Q3MJ13 1102 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 RNF19BQ6ZMZ0 732 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 OTOP3Q7RTS5 596 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 ADGRF2Q8IZF7 708 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 LEMD2Q8NC56 503 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 OR10T2Q8NGX3 314 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 NELFBQ8WX92 580 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
C9orf3-217ENST00000479161 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.59■□□□□ 0.25
C9orf3-217ENST00000479161 RWDD2AQ9UIY3 292 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 COQ4Q9Y3A0 265 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 ASB3Q9Y575 518 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 INSL5Q9Y5Q6 135 aa16.59■□□□□ 0.25
C9orf3-217ENST00000479161 MTMR11A4FU01 709 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 PRRG1O14668 218 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 SEC24AO95486 1093 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-217ENST00000479161 MYL6P60660 151 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 TNNC1P63316 161 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 PPP3CAQ08209 521 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 MAPRE1Q15691 268 aaKnown RBP16.58■□□□□ 0.24
C9orf3-217ENST00000479161 KRT39Q6A163 491 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
C9orf3-217ENST00000479161 FAM171BQ6P995 826 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms