RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TOP6BLQ8N6T0 577 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 SPATA18Q8TC71 538 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 TAF4BQ92750 862 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 APOL5Q9BWW9 433 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 PHF7Q9BWX1 381 aaPredicted RBP28.76■■■□□ 2.19
CCM2-211ENST00000478582 C1QTNF1Q9BXJ1 281 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 DZANK1Q9NVP4 752 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 SNX9Q9Y5X1 595 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 HUS1O60921 280 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 HLA-DRAP01903 254 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 FAM163BP0C2L3 166 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 ITIH3Q06033 890 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 RAB33AQ14088 237 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 CTXN3Q4LDR2 81 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 OVOS1Q6IE37 1185 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 RSPO2Q6UXX9 243 aaPredicted RBP28.75■■■□□ 2.19
CCM2-211ENST00000478582 METTL23Q86XA0 190 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 TMEM86AQ8N2M4 240 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 FBXL5Q9UKA1 691 aa28.75■■■□□ 2.19
CCM2-211ENST00000478582 PMM2O15305 246 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 MXI1P50539 228 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 CBX2Q14781 532 aaPredicted RBP28.74■■■□□ 2.19
CCM2-211ENST00000478582 WSCD1Q658N2 575 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 LILRA6Q6PI73 481 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 TAS1R2Q8TE23 839 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 FUCA2Q9BTY2 467 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 ADAM7Q9H2U9 754 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 L1RE1Q9UN81 338 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 COQ4Q9Y3A0 265 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 CDY1Q9Y6F8 540 aa28.74■■■□□ 2.19
CCM2-211ENST00000478582 ADAM12O43184 909 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 ASS1P00966 412 aaKnown RBP28.73■■■□□ 2.19
CCM2-211ENST00000478582 OR1D2P34982 312 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 PIK3CAP42336 1068 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 SOWAHAQ2M3V2 549 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 WDR72Q3MJ13 1102 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 CES5AQ6NT32 575 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 FAM114A1Q8IWE2 563 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 PDCL2Q8N4E4 241 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 CNOT6LQ96LI5 555 aaKnown RBP28.73■■■□□ 2.19
CCM2-211ENST00000478582 DNAJC25Q9H1X3 360 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 MMRN2Q9H8L6 949 aa28.73■■■□□ 2.19
CCM2-211ENST00000478582 C5orf42Q9H799 3197 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 OR6C75A6NL08 312 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 LOC730098B7Z3J9 87 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 GLUD1P00367 558 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 ZNF699Q32M78 642 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 CBWD6Q4V339 395 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 CBWD3Q5JTY5 395 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 CBWD5Q5RIA9 395 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 FBXL13Q8NEE6 735 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 HDAC7Q8WUI4 952 aa28.72■■■□□ 2.19
CCM2-211ENST00000478582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.72■■■□□ 2.19
CCM2-211ENST00000478582 SYCE3A1L190 88 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 TGM5O43548 720 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 ALADP13716 330 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 FMO5P49326 533 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 TNNC1P63316 161 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 ZNF667Q5HYK9 610 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 PALB2Q86YC2 1186 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 GLYCTKQ8IVS8 523 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 THEM5Q8N1Q8 247 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 RTP3Q9BQQ7 232 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 RAB20Q9NX57 234 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 DPP7Q9UHL4 492 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 NFE2L3Q9Y4A8 694 aa28.71■■■□□ 2.19
CCM2-211ENST00000478582 GABRDO14764 452 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 P4HA2O15460 535 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 N4BP1O75113 896 aaKnown RBP28.7■■■□□ 2.18
CCM2-211ENST00000478582 TACC1O75410 805 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 ABLIM3O94929 683 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 ROR1Q01973 937 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 KCNH2Q12809 1159 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 RARS2Q5T160 578 aaKnown RBP28.7■■■□□ 2.18
CCM2-211ENST00000478582 C12orf76Q8N812 135 aaPredicted RBP28.7■■■□□ 2.18
CCM2-211ENST00000478582 ZNF461Q8TAF7 563 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 BPIFA3Q9BQP9 254 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 IMPG2Q9BZV3 1241 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 NAT10Q9H0A0 1025 aaKnown RBP28.7■■■□□ 2.18
CCM2-211ENST00000478582 TSC2P49815 1807 aa28.7■■■□□ 2.18
CCM2-211ENST00000478582 LHX1P48742 406 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 ZSCAN23Q3MJ62 389 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 ANO6Q4KMQ2 910 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 RNF135Q8IUD6 432 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 ADGRF2Q8IZF7 708 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 SEMA4DQ92854 862 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 FAXDC2Q96IV6 333 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 RPGRIP1Q96KN7 1286 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 NECTIN4Q96NY8 510 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 MMS19Q96T76 1030 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 PLEKHA4Q9H4M7 779 aa28.69■■■□□ 2.18
CCM2-211ENST00000478582 SAMSN1Q9NSI8 373 aaKnown RBP28.69■■■□□ 2.18
CCM2-211ENST00000478582 NXF1Q9UBU9 619 aaKnown RBP28.69■■■□□ 2.18
CCM2-211ENST00000478582 P4HA1P13674 534 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 WARSP23381 471 aaKnown RBP28.68■■■□□ 2.18
CCM2-211ENST00000478582 MTHFRP42898 656 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 MYL5Q02045 173 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 TPGS2Q68CL5 300 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 CCDC150Q8NCX0 1101 aa28.68■■■□□ 2.18
CCM2-211ENST00000478582 KBTBD7Q8WVZ9 684 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms